Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq21 188 1e-45 >seq21 Length=95773 Score = 188 bits (208), Expect = 1e-45 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||||| |||| ||||||||| ||||||||| ||||| |||| ||||| ||||||| Sbjct 2653 GACAGTTTCAGGTGGGCAGTTTTTCTGGGGCGGAAGCCTCATAAAGGGTAACTGAGGCGC 2594 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232 ||||| | ||||||| |||| ||||| || | |||| ||||||||||||| | | Sbjct 2593 GCAAAGGTCCCCTCAGTCTGGACGGAAATCAGACAACGAGTGTAAAGGCAAAAGGGGGCT 2534 Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 ||||||| | ||| |||||| |||||| |||||| || |||| ||||||| |||| | Sbjct 2533 TGACTGCAAGACCTACAAGTCGAGCAGGAGCGAAAGCTGGCCTTAGTGATCCGACGGTAC 2474 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | ||||| ||||||||||| ||| ||||||| ||| || |||||| Sbjct 2473 CGCGTGGAAGGGCCGTCGCTCAACGAATAAAAGTTACTCTAGGGATA 2427 Score = 188 bits (208), Expect = 1e-45 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||||| |||| ||||||||| ||||||||| ||||| |||| ||||| ||||||| Sbjct 93199 GACAGTTTCAGGTGGGCAGTTTTTCTGGGGCGGAAGCCTCATAAAGGGTAACTGAGGCGC 93258 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232 ||||| | ||||||| |||| ||||| || | |||| ||||||||||||| | | Sbjct 93259 GCAAAGGTCCCCTCAGTCTGGACGGAAATCAGACAACGAGTGTAAAGGCAAAAGGGGGCT 93318 Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 ||||||| | ||| |||||| |||||| |||||| || |||| ||||||| |||| | Sbjct 93319 TGACTGCAAGACCTACAAGTCGAGCAGGAGCGAAAGCTGGCCTTAGTGATCCGACGGTAC 93378 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | ||||| ||||||||||| ||| ||||||| ||| || |||||| Sbjct 93379 CGCGTGGAAGGGCCGTCGCTCAACGAATAAAAGTTACTCTAGGGATA 93425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982386560768