Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1023 109 3e-22 seq1010 80.6 2e-13 >seq1023 Length=7928 Score = 109 bits (120), Expect = 3e-22 Identities = 96/112 (86%), Gaps = 6/112 (5%) Strand=Plus/Minus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| | | || |||||| |||| || |||||||||||||| || |||||| Sbjct 5110 CCGTT-GCCGGCTTCTTAACGCCAAT-CCGAGGGT-CTCACTAAGCCATT-CAATCGGTA 5055 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 5054 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 5005 >seq1010 Length=4219 Score = 80.6 bits (88), Expect = 2e-13 Identities = 56/61 (92%), Gaps = 2/61 (3%) Strand=Plus/Minus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123 || ||||||| | ||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 1228 CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCAAGC 1171 Query 124 T 124 | Sbjct 1170 T 1170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300796142240