Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1023 235 7e-60 seq1010 107 2e-21 >seq1023 Length=7928 Score = 235 bits (260), Expect = 7e-60 Identities = 182/214 (85%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 4249 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 4190 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 ||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 4189 GGCAATTGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAATTCCTGGTTCCACCGCA 4130 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183 || |||||||| ||||||||| |||||||||||||| | | || | |||||| || Sbjct 4129 CACCCAATGAAGGGCATACGGCCTCACCAAGAGGTAAGACCCGGCCAGACAGTACATACC 4070 Query 184 GTGAGGCGGACCATAGCACCCAGCCCGAGTTTCG 217 || |||| |||||| | || |||||| |||| Sbjct 4069 GTAAGGCAGACCATCCCGCCAGGCCCGAAGTTCG 4036 >seq1010 Length=4219 Score = 107 bits (118), Expect = 2e-21 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||| | |||||||| ||||| | ||||||| | |||||||||||||| |||||| Sbjct 415 CTACAGACCAACAAGATAGGCCAGA--GTCCTATCGTGTTATTCCATGCTAAAGTATTCT 358 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 |||||||||||||||||||||||||||||| ||||| |||| Sbjct 357 GGCGTAAGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595192112112