Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1023 224 1e-56 seq1010 147 2e-33 >seq1023 Length=7928 Score = 224 bits (248), Expect = 1e-56 Identities = 164/189 (87%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||| |||||| |||| |||||||||| ||||||||||||| |||| |||||| Sbjct 4136 GGAACCAGGAATTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCAATTGCCCGAATA 4195 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 4196 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCG- 4254 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| | | |||||||| | ||||||| ||| | ||||||||||| Sbjct 4255 CCGTAATGATTAATAGGAACGGTCGGGGGCATTAGTATTCCGTTGCTAGAGGTGAAATTC 4314 Query 181 TTGGATTTA 189 || |||||| Sbjct 4315 TTAGATTTA 4323 >seq1010 Length=4219 Score = 147 bits (162), Expect = 2e-33 Identities = 140/177 (79%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAA 73 ||||||||| ||||||||| ||||||||||||| | || |||||| ||| ||||||| Sbjct 317 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCTTACGCCAGAATACTTTAGCATGGAA 376 Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133 ||| | ||||||| | | |||| |||| ||| | |||||||| |||||||| || Sbjct 377 TAACACGATAGGAC--TCTGGCCTATCTTGTTGGTCTGTAGGACCG-GAGTAATGATTAA 433 Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | ||| ||||||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 434 GAGGGACAGTCGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511993214720