Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq21 87.8 2e-15 >seq21 Length=95773 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| |||||||||| | | ||| |||||||||| | || |||||||| |||| Sbjct 2450 GTTGAGCGACGGCCCTTCCACGCGGTACCGTCGGATCACTAAGGCCAGCTTTCGCTCCTG 2509 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 ||||| || ||| ||||||||||| ||| |||| || |||| Sbjct 2510 CTCGACTTGTAGGTCTTGCAGTCAAGCCCCCTTTTGCCTTTACACT 2555 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| |||||||||| | | ||| |||||||||| | || |||||||| |||| Sbjct 93402 GTTGAGCGACGGCCCTTCCACGCGGTACCGTCGGATCACTAAGGCCAGCTTTCGCTCCTG 93343 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 ||||| || ||| ||||||||||| ||| |||| || |||| Sbjct 93342 CTCGACTTGTAGGTCTTGCAGTCAAGCCCCCTTTTGCCTTTACACT 93297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473593723616