Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1023 138 2e-30 seq246 73.4 6e-11 >seq1023 Length=7928 Score = 138 bits (152), Expect = 2e-30 Identities = 138/174 (79%), Gaps = 4/174 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || | ||| | ||||||||| |||||||||||| || | |||| | Sbjct 840 GTACGAGAGGAACTGCTCA-TTC-GTATAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 897 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||| ||| ||| ||||||||||||||||||||||||||||||| | | | Sbjct 898 GCCGCGAAGCTATCATACGCTAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTACTA 957 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGC 173 ||| | |||| | ||| |||||| |||| | | ||||||||||||| Sbjct 958 GAA-ACGATGATGTTGGTCCCGCACATGTTAGTTGTGTTAAAATAGGCTTCGGC 1010 >seq246 Length=36864 Score = 73.4 bits (80), Expect = 6e-11 Identities = 90/121 (74%), Gaps = 3/121 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | | | ||||||||| | ||| | |||| || | | Sbjct 33572 GTACGAGAGGAACCGCCGGGTC--GGATAATTGGTAAT-GCGCTCGGCTGAAAAGCCGAT 33628 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| |||||| |||| || | | ||| ||||||||||||||||||||| | |||| | Sbjct 33629 GGCGCAAAGCTAACATCCGCAAGCTAATGACTGAACGCCTCTAAGTCAGAAGCTATGCTA 33688 Query 121 G 121 | Sbjct 33689 G 33689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819189143552