Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq848 82.4 1e-13 seq206 82.4 1e-13 >seq848 Length=8259430 Score = 82.4 bits (90), Expect = 1e-13 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 141 CATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACC 200 |||||| || || || |||| |||||||| || ||||||||||| ||||| || ||||| Sbjct 3578321 CATGCGCTTCTTGCCTTCCTTCTGCTTCTCCAGTAGCTTGCGCTTGCGGCTGACATCACC 3578380 Query 201 GCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCT 238 ||||||||||| || || || || || | || |||| Sbjct 3578381 ACCGTAGCATTTCGCAAGCACATTTTTGCGCAGGGCCT 3578418 >seq206 Length=21208 Score = 82.4 bits (90), Expect = 1e-13 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 141 CATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACC 200 |||||| || || || |||| |||||||| || ||||||||||| ||||| || ||||| Sbjct 7006 CATGCGCTTCTTGCCTTCCTTCTGCTTCTCCAGTAGCTTGCGCTTGCGGCTGACATCACC 6947 Query 201 GCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCT 238 ||||||||||| || || || || || | || |||| Sbjct 6946 ACCGTAGCATTTCGCAAGCACATTTTTGCGCAGGGCCT 6909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838392890368