Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20gelatinosa_20[genbank_20GCA_5F000818905.1_202015-01-16] 848 sequences; 61,726,235 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq847 95.1 4e-17 >seq847 Length=8161804 Score = 95.1 bits (104), Expect = 4e-17 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 387 GGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT 446 ||||| ||||||||||| |||||||||||| ||||||||| |||| ||||| ||||| Sbjct 2954131 GGTACCATCAAATAAACTATAACTGATTTATTGAGCCATTTGCAGGTTCACAGTATAAGC 2954072 Query 447 TGCTTATACTTAGACATGCATG 468 | || |||||||||||||||| Sbjct 2954071 AGTTTTTACTTAGACATGCATG 2954050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510387191808