Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq153 257 3e-66 seq164 104 4e-20 >seq153 Length=8666 Score = 257 bits (284), Expect = 3e-66 Identities = 206/245 (84%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 6932 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 6873 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | ||||||| | | |||| | |||||| | | |||||| ||||||||||| Sbjct 6872 ATAACACGATAGGACT--CTGGCCTATCTCGTTGGTCTGTGGGACCGGAGTAATGATTAA 6815 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| ||||||||| | ||||| ||||||||||||||||||||||||||||| | Sbjct 6814 GAGGGACAGTCGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAA 6755 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| |||| |||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 6754 AGACGAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 6696 Query 314 AGGGG 318 |||| Sbjct 6695 GGGGG 6691 >seq164 Length=174194 Score = 104 bits (114), Expect = 4e-20 Identities = 86/104 (83%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| ||||||||||||| |||||||||| |||| ||||| |||| |||| ||||| Sbjct 101881 GTATTGCATTGTCAGAGGTGCAATTCTTGGAATTATGAAAGACGAACTTCTGCAAAAGCA 101822 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || ||||||||||||||||| |||| |||| |||| | |||| Sbjct 101821 TTTGCCAAGGATGTTTTCATTGATCA-AGAACAAAAGCTGGGGG 101779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915193804096