Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq153 237 7e-60 >seq153 Length=8666 Score = 237 bits (262), Expect = 7e-60 Identities = 223/280 (80%), Gaps = 8/280 (3%) Strand=Plus/Minus Query 407 GCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAAC 466 |||||||||| |||||||||||||||||||||||| |||||||| ||||| | | || Sbjct 4117 GCCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATGCGAGCCGGTGGGTTTAACAC 4058 Query 467 CCGTGCGCGTAATGAAAGTGAACGGA--GGTGGGAACCCGTGAGGG-TGCACCATCGACC 523 || || | | | |||| | | || ||||||| || | ||||||||||||| Sbjct 4057 CCATGAG----ACGCAAGTAACCTGACTGGTGGGATGG-GTAATACCTGCACCATCGACC 4003 Query 524 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583 || | |||| | | || | |||||||| ||||||| ||||||||||||||||||||| Sbjct 4002 GACCATGATCTTCTGTGAAAGGTTTGAGTACGAGCATACCTGTTGGGACCCGAAAGATGG 3943 Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643 |||||||||||||| |||| |||||||||||||||||||||||||||||| || || | Sbjct 3942 TGAACTATGCCTGAGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGATGTGC 3883 Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||||||| | || | |||||||||||||||| Sbjct 3882 TGACGTGCAAATCGCTTTTCGGACTTGGGTATAGGGGCGA 3843 Score = 156 bits (172), Expect = 2e-35 Identities = 130/158 (82%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| |||| | || ||||||| | ||||| ||||||| Sbjct 4478 GAGTCGGGTTGCTTGGGAATGCAGCCCTAAGTAGGTGGTAAATCCCATCTAAGGCTAAAT 4419 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | || | ||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 4418 ACTGACGGGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 4359 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 |||||| | ||||| | |||||||||||| |||||| Sbjct 4358 AGAGAG-TCAAAAGTGCTTGAAATTGTTGAGGGGGAAG 4322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079985478350