Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq142 89.7 5e-16 >seq142 Length=60166 Score = 89.7 bits (98), Expect = 5e-16 Identities = 109/145 (75%), Gaps = 3/145 (2%) Strand=Plus/Plus Query 54 ACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCCTGTAACTTCGG 113 ||||||||| ||||| || || | | |||||||| |||||| || | | |||||||||| Sbjct 10783 ACTAAGGCGTTTGAGAAAACCATGTTGAAGGAACTCGGCAAAATGCCTCCGTAACTTCGG 10842 Query 114 GATAAAG-GGTCCCTACCCAGAAATGGGAGGG-CGCAGAGAATAGGTCCAGGCAACTGTT 171 || || | || |||| | | | || ||||| ||| |||||||| ||| |||||| Sbjct 10843 GAAAAGGAGGACCCT-CTCTATATTGAGAGGGTGGCACAGAATAGGGGGTGGCGACTGTT 10901 Query 172 TAACAAAAACACAGGGCTGTGCCAA 196 || ||||||||||| || ||| || Sbjct 10902 TACTAAAAACACAGGACTCTGCAAA 10926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531196516158