Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq142 86.0 6e-15 seq96 78.8 9e-13 >seq142 Length=60166 Score = 86.0 bits (94), Expect = 6e-15 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| |||||||||| | || | ||||||||| ||| Sbjct 10893 GCGACTGTTTACTAAAAACACAGGACTCTGCAAAGTGGTAACACTAAGTATAGGGTCTGA 10952 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||||||||||| |||| |||| Sbjct 10953 CGCCTGCCCGGTGCTGGAAACTTAA 10977 >seq96 Length=18243 Score = 78.8 bits (86), Expect = 9e-13 Identities = 75/96 (78%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| || || || ||| | || Sbjct 10327 ACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCTCCGCTAAGTCGTAAGACAATGT 10268 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| |||||||||||| |||||||||||| || Sbjct 10267 ATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTAAA 10232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476796872937