Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq153 298 9e-79 >seq153 Length=8666 Score = 298 bits (330), Expect = 9e-79 Identities = 221/257 (86%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6189 CTCGTTGAATGCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 6248 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC- 121 ||||||| |||||| |||||| |||||| | ||||| ||||||||||||||| | ||| Sbjct 6249 CTGTTATCGCCTCACACTTCCTTTGGCTAGTCGCCAAAAGTCCCTCTAAGAAGTCTGCCG 6308 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 || | | || | | | |||||||||||| | ||||||||||||||| |||||| || Sbjct 6309 ACTGGCAAAAGCAGCCGTGACTATTTAGCAGGCTGAGGTCTCGTTCGTTACCGGAATCAA 6368 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 || ||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6369 CCTGACAAGGCAACCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 6428 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 6429 AGAGCTCTCAATCTGTC 6445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796794774237