Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq153 392 6e-107 >seq153 Length=8666 Score = 392 bits (434), Expect = 6e-107 Identities = 264/294 (90%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | || ||| || ||||||||||||||||||||||||| Sbjct 1333 TACTGAGCCGGATTACTATGGCGGGATCGGCGCAACAGTAGGGTAAAACTAACCTGTCTC 1392 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 1393 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTGGAG 1452 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1453 AATTCTGCTTCTCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 1512 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1513 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCT 1572 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || ||||||||||||||||||| |||||| |||||||||| Sbjct 1573 TCAAATCCCGAAGGTCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 1626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854394215712