Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq153 149 6e-34 >seq153 Length=8666 Score = 149 bits (164), Expect = 6e-34 Identities = 142/178 (80%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 6932 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 6873 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 6872 ATAACACGATAGGACT--CTGGCCTATCTCGTTGGTCTGTGGGACCGGA-GTAATGATTA 6816 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| ||||||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 6815 AGAGGGACAGTCGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 6758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511996642080