Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq153 331 2e-88 >seq153 Length=8666 Score = 331 bits (366), Expect = 2e-88 Identities = 263/311 (85%), Gaps = 5/311 (2%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGG-CTTCTTA 78 || |||||||| | |||||||||||| || | | ||||| || |||| | | ||||||| Sbjct 6354 GAACGAGACCTCAGCCTGCTAAATAGTCACGGCTGCTTTTGCCAGTCGGCAGACTTCTTA 6295 Query 79 GAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 |||||||| | ||| | |||| | |||||| |||||| ||||||||||||||||||||| Sbjct 6294 GAGGGACTTTTGGCGACTAGCCAAAGGAAGTGTGAGGCGATAACAGGTCTGTGATGCCCT 6235 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 ||||||||||||||||||||||||||||||||| | ||||||| ||| |||||| Sbjct 6234 TAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCATTCAACGAGCCTATC--CTTGGC 6177 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 || ||| | |||||||||| | ||||| ||||| |||||||||| ||||||||||| Sbjct 6176 CGACAGGCCCGGGTAATCTT-TGAAACTGCATCGTGATGGGGATAGATTATTGCAATTAT 6118 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 | ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 6117 TAATCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCC 6058 Query 318 TGCCCTTTGTA 328 ||||||||||| Sbjct 6057 TGCCCTTTGTA 6047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947193587456