Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq153 78.8 2e-12 >seq153 Length=8666 Score = 78.8 bits (86), Expect = 2e-12 Identities = 101/134 (75%), Gaps = 4/134 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| |||||||| ||| | |||| |||| | Sbjct 1335 GTACGAGAGGAACCGCCGG-TTCAGA-TAATTGGTAAC-GCGCTCGCCTGAAAAGGCGCT 1279 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| | ||||||||||| || | || ||||||||||||||| |||| |||||| | Sbjct 1278 GGCGCAACGCTACCATCTGTGGGCTAATACCTGAACGCCTCTAAGGTAGAAGCCATGCTA 1219 Query 121 -GAACGGGGTGATT 133 | |||||| ||| Sbjct 1218 GGCGCGGGGTCATT 1205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819194627328