Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trebouxia_20sp._20TZW2008_20[genbank_20GCA_5F002118135.1_202017-03- 31] 677 sequences; 69,346,529 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq153 605 9e-171 >seq153 Length=8666 Score = 605 bits (670), Expect = 9e-171 Identities = 440/506 (87%), Gaps = 4/506 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| |||| ||||| |||| |||||||||||||||||| Sbjct 7160 GTACTCATTCCAATTACCAGACTTAAAAAAGCCCGGTATTGTTATTTATTGTCACTACCT 7219 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| || || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7220 CCCTGTATCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 7279 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||| | |||| ||||||| |||||||| Sbjct 7280 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATCCTCCGTCACCCGTTACCACCATGGTT 7339 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||| |||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 7340 GGCCTCTATCCAACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAAACATCGTCGGCA 7399 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC--GTTG 298 || |||| | |||||||| ||||||| |||| ||||| ||| | | | | || | Sbjct 7400 CAGGGCCGTACGATTCGTGAAGTTATCATGATTCACC-GCGAGTCGGGTTGCCCCGGTCG 7458 Query 299 GTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCT 358 | ||||||||||||||||| |||||| ||||| ||| ||| ||| ||||||||||| Sbjct 7459 GCCTTTTATCTAATAAATACGTCCCTTCGTAAGTC-GGGATTTGCGCACGTATTAGCTCT 7517 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 |||||||| |||||||||| ||||||| |||| ||||||||||| |||||||||||||| Sbjct 7518 AGAATTACTACGGTTATCCGAGTAGTAAAGTACCATCAAATAAACTATAACTGATTTAAT 7577 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| Sbjct 7578 GAGCCATTCGCAGTTTCACAGTATAAGCAGTTTATACTTAGACATGCATGGCTTAATCTT 7637 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 7638 TGAGACAAGCATATGACTACTGGCAG 7663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510389774592