Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1056 298 8e-79 seq947 291 1e-76 seq677 291 1e-76 seq295 291 1e-76 seq165 291 1e-76 seq162 291 1e-76 seq128 291 1e-76 seq118 291 1e-76 seq13 291 1e-76 seq951 286 5e-75 seq68 286 5e-75 seq50 282 6e-74 seq1033 214 3e-53 seq796 149 9e-34 seq196 123 4e-26 seq56 116 6e-24 >seq1056 Length=2102 Score = 298 bits (330), Expect = 8e-79 Identities = 222/256 (87%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||| Sbjct 53 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATTTC 111 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 112 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 171 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| ||||||||| ||||| ||||||| | |||||||||||||||||||| Sbjct 172 CCCGGGCCTCTCGGCCAAG--GATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 229 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||| |||||| |||||| | | || || | Sbjct 230 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACG 289 Query 241 GCCAT-CTCCCTCGAA 255 | || |||||| || Sbjct 290 CCAATAGTCCCTCTAA 305 >seq947 Length=2738 Score = 291 bits (322), Expect = 1e-76 Identities = 221/256 (86%), Gaps = 5/256 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||| | Sbjct 2071 GTACAAAGGGCAGGGACGTAATCAACGCGAG-TTGATGACTCGCGCTTACTAGGCATT-C 2128 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 2129 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 2188 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||| ||||||| | |||||||||||||||||||| Sbjct 2189 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 2246 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||| |||||| |||||| | | || || | Sbjct 2247 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACG 2306 Query 241 GCCAT-CTCCCTCGAA 255 | || |||||| || Sbjct 2307 CCAATAGTCCCTCTAA 2322 >seq677 Length=6879 Score = 291 bits (322), Expect = 1e-76 Identities = 221/256 (86%), Gaps = 5/256 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | Sbjct 332 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 389 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 390 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 449 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||| ||||||| | |||||||||||||||||||| Sbjct 450 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 507 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||| |||||| |||||| | | || || | Sbjct 508 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACG 567 Query 241 GCCAT-CTCCCTCGAA 255 | || |||||| || Sbjct 568 CCAATAGTCCCTCTAA 583 >seq295 Length=14263 Score = 291 bits (322), Expect = 1e-76 Identities = 221/256 (86%), Gaps = 5/256 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | Sbjct 7014 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 6957 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 6956 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 6897 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||| ||||||| | |||||||||||||||||||| Sbjct 6896 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 6839 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||| |||||| |||||| | | || || | Sbjct 6838 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACG 6779 Query 241 GCCAT-CTCCCTCGAA 255 | || |||||| || Sbjct 6778 CCAATAGTCCCTCTAA 6763 Score = 277 bits (306), Expect = 3e-72 Identities = 216/253 (85%), Gaps = 5/253 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | Sbjct 5927 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 5870 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 5869 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 5810 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||| ||||||| | |||||||||||||||||||| Sbjct 5809 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 5752 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||| ||| |||||| |||||| | | || || | Sbjct 5751 CCCAGAACATCTAAGGGCATCACAGACCCTGTATCGCCTCATACTTCCATTGGCTGAACG 5692 Query 241 GCCAT-CTCCCTC 252 | || |||||| Sbjct 5691 CCAATAGTCCCTC 5679 >seq165 Length=45508 Score = 291 bits (322), Expect = 1e-76 Identities = 221/256 (86%), Gaps = 5/256 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | Sbjct 4504 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 4561 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 4562 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 4621 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||| ||||||| | |||||||||||||||||||| Sbjct 4622 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 4679 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||| |||||| |||||| | | || || | Sbjct 4680 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACG 4739 Query 241 GCCAT-CTCCCTCGAA 255 | || |||||| || Sbjct 4740 CCAATAGTCCCTCTAA 4755 Score = 291 bits (322), Expect = 1e-76 Identities = 221/256 (86%), Gaps = 5/256 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | Sbjct 5570 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 5627 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 5628 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 5687 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||| ||||||| | |||||||||||||||||||| Sbjct 5688 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 5745 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||| |||||| |||||| | | || || | Sbjct 5746 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACG 5805 Query 241 GCCAT-CTCCCTCGAA 255 | || |||||| || Sbjct 5806 CCAATAGTCCCTCTAA 5821 Score = 291 bits (322), Expect = 1e-76 Identities = 221/256 (86%), Gaps = 5/256 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | Sbjct 32364 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 32421 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 32422 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 32481 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||| ||||||| | |||||||||||||||||||| Sbjct 32482 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 32539 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||| |||||| |||||| | | || || | Sbjct 32540 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACG 32599 Query 241 GCCAT-CTCCCTCGAA 255 | || |||||| || Sbjct 32600 CCAATAGTCCCTCTAA 32615 >seq162 Length=49623 Score = 291 bits (322), Expect = 1e-76 Identities = 221/256 (86%), Gaps = 5/256 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | Sbjct 48418 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 48361 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 48360 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 48301 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||| ||||||| | |||||||||||||||||||| Sbjct 48300 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 48243 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||| |||||| |||||| | | || || | Sbjct 48242 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACG 48183 Query 241 GCCAT-CTCCCTCGAA 255 | || |||||| || Sbjct 48182 CCAATAGTCCCTCTAA 48167 Score = 271 bits (300), Expect = 1e-70 Identities = 210/245 (86%), Gaps = 5/245 (2%) Strand=Plus/Minus Query 12 AGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGA 71 ||||||||| |||||||||||| |||||||||||||||||||| ||| |||||||||||| Sbjct 46951 AGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-CCTCGTTGAAGA 46894 Query 72 CCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGT 131 | || ||||||||| ||||||||||||||||| | ||| |||||||||||| ||| | Sbjct 46893 CTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTACCCGGGCCTCT 46834 Query 132 CGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATC 191 ||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||| Sbjct 46833 CGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATC 46776 Query 192 TAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTCCC 250 ||||||||||||||||||||||| |||||| |||||| | | || || | | || |||| Sbjct 46775 TAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACGCCAATAGTCCC 46716 Query 251 TCGAA 255 || || Sbjct 46715 TCTAA 46711 >seq128 Length=133146 Score = 291 bits (322), Expect = 1e-76 Identities = 221/256 (86%), Gaps = 5/256 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | Sbjct 131406 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 131349 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 131348 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 131289 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||| ||||||| | |||||||||||||||||||| Sbjct 131288 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 131231 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||| |||||| |||||| | | || || | Sbjct 131230 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACG 131171 Query 241 GCCAT-CTCCCTCGAA 255 | || |||||| || Sbjct 131170 CCAATAGTCCCTCTAA 131155 >seq118 Length=164916 Score = 291 bits (322), Expect = 1e-76 Identities = 221/256 (86%), Gaps = 5/256 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | Sbjct 145126 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 145069 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 145068 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 145009 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||| ||||||| | |||||||||||||||||||| Sbjct 145008 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 144951 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||| |||||| |||||| | | || || | Sbjct 144950 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACG 144891 Query 241 GCCAT-CTCCCTCGAA 255 | || |||||| || Sbjct 144890 CCAATAGTCCCTCTAA 144875 >seq13 Length=2129673 Score = 291 bits (322), Expect = 1e-76 Identities = 221/256 (86%), Gaps = 5/256 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | Sbjct 362984 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 363041 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 363042 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 363101 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||| ||||||| | |||||||||||||||||||| Sbjct 363102 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 363159 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||| |||||| |||||| | | || || | Sbjct 363160 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACG 363219 Query 241 GCCAT-CTCCCTCGAA 255 | || |||||| || Sbjct 363220 CCAATAGTCCCTCTAA 363235 >seq951 Length=2489 Score = 286 bits (316), Expect = 5e-75 Identities = 220/256 (86%), Gaps = 5/256 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | Sbjct 519 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 576 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 577 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 636 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||| ||||||| | |||||||||||||||||||| Sbjct 637 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 694 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||| | |||||| |||||| | | || || | Sbjct 695 CCCAGAACATCTAAGGGCATCACAGACCTGTTTTCGCCTCATACTTCCATTGGCTGAACG 754 Query 241 GCCAT-CTCCCTCGAA 255 | || |||||| || Sbjct 755 CCAATAGTCCCTCTAA 770 >seq68 Length=669586 Score = 286 bits (316), Expect = 5e-75 Identities = 218/253 (86%), Gaps = 5/253 (2%) Strand=Plus/Plus Query 4 CAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTC 63 ||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| |||| Sbjct 575644 CAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-CCTC 575701 Query 64 GTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCC 123 ||||||||| || ||||||||| ||||||||||||||||| | ||| |||||||||| Sbjct 575702 GTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTACCC 575761 Query 124 GGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCC 183 || ||| |||||||||| |||| ||||||| | ||||||||||||||||||||||| Sbjct 575762 GGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGGCCC 575819 Query 184 AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCC 243 ||||||||||||||||||||||||||||||| |||||| |||||| | | || || | | Sbjct 575820 AGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACGCCA 575879 Query 244 AT-CTCCCTCGAA 255 || |||||| || Sbjct 575880 ATAGTCCCTCTAA 575892 >seq50 Length=1026462 Score = 282 bits (312), Expect = 6e-74 Identities = 219/256 (86%), Gaps = 5/256 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||||||||||| ||||||||||||||||| || ||| | Sbjct 277598 GTACAAAGGGCAGGGACATAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGCATT-C 277541 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 277540 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 277481 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| |||||||||| |||| ||||||| | |||||||||||||||||||| Sbjct 277480 CCCGGGCCTCTCGGCCAAGG--ATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGG 277423 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||| |||||| |||||| | | || || | Sbjct 277422 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACG 277363 Query 241 GCCAT-CTCCCTCGAA 255 | || |||||| || Sbjct 277362 CCAATAGTCCCTCTAA 277347 >seq1033 Length=2159 Score = 214 bits (236), Expect = 3e-53 Identities = 167/193 (87%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||| | Sbjct 1972 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGACATT-C 2029 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||| || ||||||||| ||||||||||||||||| | ||| ||||||| Sbjct 2030 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 2089 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| ||||||||| ||||| |||| || | ||||||||||||||| |||| Sbjct 2090 CCCGGGCCTCTCGGCCAAG--GATAGGCTCG-TGGTCGCGTCAGTGTAGCGCGCG-GCGG 2145 Query 181 CCCAGAACATCTA 193 ||||||||||||| Sbjct 2146 CCCAGAACATCTA 2158 >seq796 Length=6210 Score = 149 bits (164), Expect = 9e-34 Identities = 106/119 (89%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| | Sbjct 678 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 735 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT 119 |||||||||||| || ||||||||| ||||||||||||||||| | ||| |||||| Sbjct 736 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATT 794 >seq196 Length=39910 Score = 123 bits (136), Expect = 4e-26 Identities = 97/115 (84%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 142 GATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATC 201 ||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 GATAGGCTCGTTGGTCGCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATC 1082 Query 202 ACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTCCCTCGAA 255 ||||||||||||| |||||| |||||| | | || || | | || |||||| || Sbjct 1081 ACAGACCTGTTATCGCCTCATACTTCCATTGGCTGAACGCCAATAGTCCCTCTAA 1027 Score = 78.8 bits (86), Expect = 1e-12 Identities = 53/57 (93%), Gaps = 2/57 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAAT 57 |||||||||||||||||||| ||||||||||| ||||||||||||| ||||||| || Sbjct 3482 GTACAAAGGGCAGGGACGTAATCAACGCGAGC-TGATGACTCGCGC-TACTAGGCAT 3428 >seq56 Length=912469 Score = 116 bits (128), Expect = 6e-24 Identities = 97/115 (84%), Gaps = 9/115 (8%) Strand=Plus/Minus Query 114 AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCG 173 |||||||||||| ||| |||||||||| |||| |||| ||| || | | |||||| Sbjct 789795 AAGATTACCCGGGCCTCTCGGCCAAGG--ATAGGCTCGCTGA-----TC-GCG-AGCGCG 789745 Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||| ||| |||||||||||||||||| |||||| |||||| Sbjct 789744 CGTGCGGCCCAGAACATCAAAGCGCATCACAGACCTGTTATCGCCTCATACTTCC 789690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751990886465