Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq1078 131 9e-29
seq1056 131 9e-29
seq1034 131 9e-29
seq947 131 9e-29
seq710 131 9e-29
seq677 131 9e-29
seq295 131 9e-29
seq165 131 9e-29
seq162 131 9e-29
seq118 131 9e-29
seq68 131 9e-29
seq27 131 9e-29
seq13 131 9e-29
seq196 127 1e-27
seq431 91.5 8e-17
>seq1078
Length=2075
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 1503 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 1562
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 1563 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 1619
>seq1056
Length=2102
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 580 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 639
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 640 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 696
>seq1034
Length=2333
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 1549 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 1608
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 1609 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 1665
>seq947
Length=2738
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 2597 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 2656
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 2657 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 2713
>seq710
Length=6353
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 594 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 535
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 534 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 478
>seq677
Length=6879
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 858 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 917
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 918 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 974
Score = 123 bits (136), Expect = 1e-26
Identities = 95/113 (84%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 5 CCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATC 64
||||| ||||||||||||| |||||||| | |||||| | | |||||| || |||
Sbjct 4396 CCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCCAATC 4455
Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 4456 CCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 4508
>seq295
Length=14263
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 3890 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 3831
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 3830 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 3774
>seq165
Length=45508
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 5030 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 5089
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 5090 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 5146
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 6096 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 6155
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 6156 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 6212
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 32890 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCANAAGAACATCTGCC 32949
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 32950 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 33006
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 34273 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 34332
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 34333 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 34389
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 40011 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 40070
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 40071 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 40127
>seq162
Length=49623
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 41087 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 41028
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 41027 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 40971
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 46436 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 46377
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 46376 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 46320
Score = 125 bits (138), Expect = 4e-27
Identities = 98/117 (84%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 47892 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 47833
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||| ||| |||||||||||
Sbjct 47832 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTGTCTAATCGTCTTCGA 47776
>seq118
Length=164916
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 144600 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 144541
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 144540 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 144484
>seq68
Length=669586
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 576167 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 576226
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 576227 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 576283
Score = 84.2 bits (92), Expect = 1e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|| ||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 578051 CCAATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 578109
>seq27
Length=1567171
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 783891 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 783832
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 783831 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 783775
>seq13
Length=2129673
Score = 131 bits (144), Expect = 9e-29
Identities = 99/117 (85%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | |||||| | | |||||| ||
Sbjct 363510 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 363569
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 363570 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 363626
>seq196
Length=39910
Score = 127 bits (140), Expect = 1e-27
Identities = 98/117 (84%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||||||| |||| |||||||| | |||||| | | |||||| ||
Sbjct 752 GAACCCAAAAACTTTGATNTCTCATAAGGTGCTGGCAGAGTCATCAAAAGAACATCTGCC 693
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 692 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 636
>seq431
Length=7111
Score = 91.5 bits (100), Expect = 8e-17
Identities = 81/99 (82%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 19 TTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAG 78
||||| |||||||| | |||||| | | |||||| | ||||||||||||||| |
Sbjct 1982 TTCTCATAAGGTGCTGGCAGAGTCATCAA-AGAACATCTGCA-ATCCCTAGTCGGCATCG 2039
Query 79 TTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| |||| ||||||||||||||||| |||||||||||
Sbjct 2040 TTTATGGTTGAGACTACGACGGTATCTAATCGTCTTCGA 2078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278396734890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |