Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq16 159 9e-37
>seq16
Length=2066233
Score = 159 bits (176), Expect = 9e-37
Identities = 198/267 (74%), Gaps = 3/267 (1%)
Strand=Plus/Plus
Query 73 CGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCG 132
|||||| | |||||||||||||| | ||| || | ||| | ||| |||| || |
Sbjct 937891 CGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTCGTAAAGTCTAATGTCAAATACCAG 937950
Query 133 GGCTTAACCTGGGAATTGCATTTGTG-ACTGCACGA-CTAGAGTGTGTCAGAGGGGGGTG 190
|||| ||||| ||| ||||| | | ||| ||||| || |||| | ||||| | |
Sbjct 937951 GGCTCAACCTTGGATCGGCATTAGAGCACT-CACGAGCTTGAGTACGGTAGAGGCAGAGG 938009
Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250
||| |||| ||| ||| |||||||||||||| || |||| |||||||| |||||||||
Sbjct 938010 GAACTCCAAGTGGAGCGGTGAAATGCGTAGAGATTTGGAAGAACACCAGAGGCGAAGGCG 938069
Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310
| ||||| | |||||| || | |||||||| ||||||| || ||||||||||
Sbjct 938070 CTCTGCTGGGCCGAAACTGACACTGAGAGACGAAAGCTGGGGGAGCGAATAGGATTAGAT 938129
Query 311 ACCCTGGTAGTCCACGCCCTAAACGAT 337
||||| ||||||| ||| ||||| ||
Sbjct 938130 ACCCTAGTAGTCCCAGCCGTAAACTAT 938156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289583867104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |