Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq29 241 3e-61
>seq29
Length=1535765
Score = 241 bits (266), Expect = 3e-61
Identities = 248/323 (77%), Gaps = 16/323 (5%)
Strand=Plus/Minus
Query 14 AGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATT 73
|| ||||| | || ||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 182326 AGGCCTTCAT-CATTCACGCGGTATTG-CTGGATCAGGCTTTCGCCCATTGTCCAATATT 182269
Query 74 CCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCAT 133
||||||||||||||| ||||||||||||| ||||| ||||| |||||||| ||||||||
Sbjct 182268 CCCCACTGCTGCCTCTCGTAGGAGTCTGGGCCGTGATTCAGTCCCAGTGTGGCTGATCAT 182209
Query 134 CCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193
||||||||||||| || |||||| | |||||| ||||||||| |||||||| |||||
Sbjct 182208 CCTCTCAGACCAGCTAAAGATCGTAGGCTTGGTAGGCCATTACCCTACCAACTACCTAAT 182149
Query 194 CCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGAC 253
| | ||||||||| |||| | || ||||| || |||
Sbjct 182148 CTTGCGCGGGCTCATCTATCAGCGATA------AA--------TCTTTCCTCCTTAGAGA 182103
Query 254 GTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCTAGG 313
||| |||||||||| || |||||| || ||||| || ||| ||| ||||||| | |
Sbjct 182102 ATATACGGTATTAGCATCTGTTTCCAAATGTTATTCCGTACTGATAGGTAGATTCCCACG 182043
Query 314 CATTACTCACCCGTCCGCCGCTC 336
|||||||||||| ||| |||
Sbjct 182042 TGTTACTCACCCGTTTGCCACTC 182020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071986589280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |