Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq33 93.3 2e-16
seq65 84.2 8e-14
seq1078 80.6 1e-12
seq1033 80.6 1e-12
seq987 80.6 1e-12
seq821 80.6 1e-12
seq763 80.6 1e-12
seq699 80.6 1e-12
seq663 80.6 1e-12
seq576 80.6 1e-12
seq525 80.6 1e-12
seq522 80.6 1e-12
seq316 80.6 1e-12
seq196 80.6 1e-12
seq165 80.6 1e-12
seq162 80.6 1e-12
seq128 80.6 1e-12
seq92 80.6 1e-12
seq10 80.6 1e-12
seq29 77.0 1e-11
seq9 75.2 4e-11
>seq33
Length=1491501
Score = 93.3 bits (102), Expect = 2e-16
Identities = 104/135 (77%), Gaps = 13/135 (10%)
Strand=Plus/Plus
Query 400 CATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATT 459
|||| | |||||| |||||||||| || | |||| ||| |||||||| | ||
Sbjct 206279 CATTATACAAAAGATACGCCGTCAC--GGAA--TAAA------TTCCGCTCCGACTGCTT 206328
Query 460 GTAGGCACATGGTTTCAGGTACTATTTCACTCCCC--GCCAGGGGTACTTTTCACCTTTC 517
||| ||| |||||||| ||||||||||||| | | ||||| |||||||||||||
Sbjct 206329 GTAAGCATTCGGTTTCAGTGTCTATTTCACTCCCGTTGTC-GGGGTTCTTTTCACCTTTC 206387
Query 518 CCTCACGGTACTTGT 532
|||||||||||||||
Sbjct 206388 CCTCACGGTACTTGT 206402
>seq65
Length=794414
Score = 84.2 bits (92), Expect = 8e-14
Identities = 93/123 (76%), Gaps = 12/123 (10%)
Strand=Plus/Plus
Query 388 AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAG 447
|| |||| |||||||||||||| |||||||| ||||| | |||| ||| |
Sbjct 438215 AAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCACAAG---CCTA-------CTT--G 438262
Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTT 507
|||| || | |||| ||| | ||||||| || |||||||||||||| ||||||| |||
Sbjct 438263 CTCCCACTGCTTGTCAGCATACGGTTTCATGTTCTATTTCACTCCCCAACAGGGGTTCTT 438322
Query 508 TTC 510
|||
Sbjct 438323 TTC 438325
>seq1078
Length=2075
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 58 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 117
Query 562 CTTA 565
||||
Sbjct 118 CTTA 121
>seq1033
Length=2159
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 507 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 566
Query 562 CTTA 565
||||
Sbjct 567 CTTA 570
>seq987
Length=2347
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 1805 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 1864
Query 562 CTTA 565
||||
Sbjct 1865 CTTA 1868
>seq821
Length=6062
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 902 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 843
Query 562 CTTA 565
||||
Sbjct 842 CTTA 839
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 2416 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 2357
Query 562 CTTA 565
||||
Sbjct 2356 CTTA 2353
>seq763
Length=5051
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 328 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 269
Query 562 CTTA 565
||||
Sbjct 268 CTTA 265
>seq699
Length=6362
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 924 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 983
Query 562 CTTA 565
||||
Sbjct 984 CTTA 987
>seq663
Length=6474
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 334 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 275
Query 562 CTTA 565
||||
Sbjct 274 CTTA 271
>seq576
Length=6107
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 5343 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 5284
Query 562 CTTA 565
||||
Sbjct 5283 CTTA 5280
>seq525
Length=4110
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 657 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 598
Query 562 CTTA 565
||||
Sbjct 597 CTTA 594
>seq522
Length=6502
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 5829 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 5888
Query 562 CTTA 565
||||
Sbjct 5889 CTTA 5892
Score = 77.0 bits (84), Expect = 1e-11
Identities = 55/64 (86%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| || ||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 4658 GTTCTTTTCATCTNTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 4717
Query 562 CTTA 565
||||
Sbjct 4718 CTTA 4721
>seq316
Length=13033
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 597 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 538
Query 562 CTTA 565
||||
Sbjct 537 CTTA 534
>seq196
Length=39910
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 4761 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 4702
Query 562 CTTA 565
||||
Sbjct 4701 CTTA 4698
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 38002 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 37943
Query 562 CTTA 565
||||
Sbjct 37942 CTTA 37939
>seq165
Length=45508
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 3668 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 3727
Query 562 CTTA 565
||||
Sbjct 3728 CTTA 3731
>seq162
Length=49623
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 1050 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 991
Query 562 CTTA 565
||||
Sbjct 990 CTTA 987
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 2188 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 2129
Query 562 CTTA 565
||||
Sbjct 2128 CTTA 2125
>seq128
Length=133146
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 132684 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 132625
Query 562 CTTA 565
||||
Sbjct 132624 CTTA 132621
>seq92
Length=408206
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 101915 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 101856
Query 562 CTTA 565
||||
Sbjct 101855 CTTA 101852
>seq10
Length=2191866
Score = 80.6 bits (88), Expect = 1e-12
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||||||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 2016483 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 2016424
Query 562 CTTA 565
||||
Sbjct 2016423 CTTA 2016420
>seq29
Length=1535765
Score = 77.0 bits (84), Expect = 1e-11
Identities = 53/60 (88%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 506 TTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565
|||||| |||||||||||||||||||| ||||||||||| | || ||||||||| ||||
Sbjct 320373 TTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGCCTTA 320314
>seq9
Length=2229794
Score = 75.2 bits (82), Expect = 4e-11
Identities = 55/64 (86%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| ||| ||| |||||||||||||||||||| ||||||||||| | || |||||||||
Sbjct 453301 GTTCTTGTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGT 453242
Query 562 CTTA 565
||||
Sbjct 453241 CTTA 453238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817577261824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |