Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq33 158 3e-36
seq65 93.3 1e-16
seq1078 84.2 5e-14
seq1033 84.2 5e-14
seq987 84.2 5e-14
seq821 84.2 5e-14
seq763 84.2 5e-14
seq699 84.2 5e-14
seq663 84.2 5e-14
seq576 84.2 5e-14
seq525 84.2 5e-14
seq522 84.2 5e-14
seq316 84.2 5e-14
seq196 84.2 5e-14
seq165 84.2 5e-14
seq162 84.2 5e-14
seq128 84.2 5e-14
seq92 84.2 5e-14
seq10 84.2 5e-14
seq29 78.8 2e-12
seq9 75.2 3e-11
seq1022 73.4 1e-10
>seq33
Length=1491501
Score = 158 bits (174), Expect = 3e-36
Identities = 117/137 (85%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 202 GTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTT 261
|| |||||||||||||||||||| ||||| ||||| || ||| | ||||| |||||||
Sbjct 206269 GTTGCTGACCCATTATACAAAAGATACGCCGTCACGGAATAAATTCCGCTCCGACTGCTT 206328
Query 262 GTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCC 321
||| |||| ||||||||| |||||||||||||| | ||||||||||||| |||||||
Sbjct 206329 GTAAGCATTCGGTTTCAGTGTCTATTTCACTCCCGTTGTCGGGGTTCTTTTCACCTTTCC 206388
Query 322 CTCACGGTACTAGTTCA 338
||||||||||| |||||
Sbjct 206389 CTCACGGTACTTGTTCA 206405
>seq65
Length=794414
Score = 93.3 bits (102), Expect = 1e-16
Identities = 92/117 (79%), Gaps = 3/117 (3%)
Strand=Plus/Plus
Query 198 ATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACT 257
||||||||| | | |||| | ||| ||| |||| ||||| | | || ||||||||
Sbjct 438213 ATAAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCACAAGCCTACTTG--CTCCCACT 438270
Query 258 GCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCG 314
|||||| ||||||||||||| | ||||||||||||||| | |||||||||||||
Sbjct 438271 GCTTGTCAGCATACGGTTTCATGTTCTATTTCACTCCCC-AACAGGGGTTCTTTTCG 438326
>seq1078
Length=2075
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 58 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 117
Query 365 CTTGGA 370
||| ||
Sbjct 118 CTTAGA 123
>seq1033
Length=2159
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 507 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 566
Query 365 CTTGGA 370
||| ||
Sbjct 567 CTTAGA 572
>seq987
Length=2347
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 1805 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 1864
Query 365 CTTGGA 370
||| ||
Sbjct 1865 CTTAGA 1870
>seq821
Length=6062
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 902 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 843
Query 365 CTTGGA 370
||| ||
Sbjct 842 CTTAGA 837
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 2416 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 2357
Query 365 CTTGGA 370
||| ||
Sbjct 2356 CTTAGA 2351
>seq763
Length=5051
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 328 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 269
Query 365 CTTGGA 370
||| ||
Sbjct 268 CTTAGA 263
>seq699
Length=6362
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 924 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 983
Query 365 CTTGGA 370
||| ||
Sbjct 984 CTTAGA 989
>seq663
Length=6474
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 334 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 275
Query 365 CTTGGA 370
||| ||
Sbjct 274 CTTAGA 269
>seq576
Length=6107
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 5343 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 5284
Query 365 CTTGGA 370
||| ||
Sbjct 5283 CTTAGA 5278
>seq525
Length=4110
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 657 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 598
Query 365 CTTGGA 370
||| ||
Sbjct 597 CTTAGA 592
>seq522
Length=6502
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 5829 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 5888
Query 365 CTTGGA 370
||| ||
Sbjct 5889 CTTAGA 5894
Score = 80.6 bits (88), Expect = 7e-13
Identities = 57/66 (86%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| || |||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 4658 GTTCTTTTCATCTNTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 4717
Query 365 CTTGGA 370
||| ||
Sbjct 4718 CTTAGA 4723
>seq316
Length=13033
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 597 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 538
Query 365 CTTGGA 370
||| ||
Sbjct 537 CTTAGA 532
>seq196
Length=39910
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 4761 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 4702
Query 365 CTTGGA 370
||| ||
Sbjct 4701 CTTAGA 4696
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 38002 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 37943
Query 365 CTTGGA 370
||| ||
Sbjct 37942 CTTAGA 37937
>seq165
Length=45508
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 3668 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 3727
Query 365 CTTGGA 370
||| ||
Sbjct 3728 CTTAGA 3733
>seq162
Length=49623
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 1050 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 991
Query 365 CTTGGA 370
||| ||
Sbjct 990 CTTAGA 985
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 2188 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 2129
Query 365 CTTGGA 370
||| ||
Sbjct 2128 CTTAGA 2123
>seq128
Length=133146
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 132684 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 132625
Query 365 CTTGGA 370
||| ||
Sbjct 132624 CTTAGA 132619
>seq92
Length=408206
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 101915 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 101856
Query 365 CTTGGA 370
||| ||
Sbjct 101855 CTTAGA 101850
>seq10
Length=2191866
Score = 84.2 bits (92), Expect = 5e-14
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 2016483 GTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 2016424
Query 365 CTTGGA 370
||| ||
Sbjct 2016423 CTTAGA 2016418
>seq29
Length=1535765
Score = 78.8 bits (86), Expect = 2e-12
Identities = 57/66 (86%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||| ||||| ||||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct 320377 GTTATTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGC 320318
Query 365 CTTGGA 370
||| ||
Sbjct 320317 CTTAGA 320312
>seq9
Length=2229794
Score = 75.2 bits (82), Expect = 3e-11
Identities = 56/66 (85%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|||||| || ||||||||||||||||| |||| ||||||||| |||| |||||||||
Sbjct 453301 GTTCTTGTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGT 453242
Query 365 CTTGGA 370
||| ||
Sbjct 453241 CTTAGA 453236
>seq1022
Length=2201
Score = 73.4 bits (80), Expect = 1e-10
Identities = 49/55 (89%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 316 CTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370
||||||||||||||||| |||| ||||||||| |||| ||||||||||||| ||
Sbjct 1376 CTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTCAGCAGTATTTAGCCTTAGA 1430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241584467584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |