Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq29 257 3e-66 >seq29 Length=1535765 Score = 257 bits (284), Expect = 3e-66 Identities = 247/318 (78%), Gaps = 18/318 (6%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| |||| |||||||| |||||| ||||||||||||||| ||||||||||| Sbjct 182301 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCTCGTAGGAGTCT 182242 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||| ||||||||| |||||| | ||| |||||||| || |||| |||||| || Sbjct 182241 GGGCCGTGATTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAAAGATCGTAGG 182182 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 |||||| ||| |||| | ||||||||||||||| |||| || ||||| ||||||||| Sbjct 182181 CTTGGTAGGCCATTACCCTACCAACTACCTAATCTTGCGCGGGCTCATCTATCAGCGATA 182122 Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCC 246 ||||||| | |||| || | ||| |||||||||| | |||||| Sbjct 182121 AATCTTT----------------CCTCCTTAGAGAATATACGGTATTAGCATCTGTTTCC 182078 Query 247 AAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTAA 306 ||| |||||||| |||| ||| || || | |||||||||||||||||| |||||| | Sbjct 182077 AAATGTTATTCCGTACTGATAGGTAGATT-CCCACGTGTTACTCACCCGTTTGCCACTCA 182019 Query 307 GCTATATATCCAGCAAGC 324 ||| | | ||||||| Sbjct 182018 -CTAAAATTGGAGCAAGC 182002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998387510016