Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq29 257 3e-66
>seq29
Length=1535765
Score = 257 bits (284), Expect = 3e-66
Identities = 247/318 (78%), Gaps = 18/318 (6%)
Strand=Plus/Minus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
|||| |||||| |||| |||||||| |||||| ||||||||||||||| |||||||||||
Sbjct 182301 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCTCGTAGGAGTCT 182242
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
|||||||| ||||||||| |||||| | ||| |||||||| || |||| |||||| ||
Sbjct 182241 GGGCCGTGATTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAAAGATCGTAGG 182182
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186
|||||| ||| |||| | ||||||||||||||| |||| || ||||| |||||||||
Sbjct 182181 CTTGGTAGGCCATTACCCTACCAACTACCTAATCTTGCGCGGGCTCATCTATCAGCGATA 182122
Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCC 246
||||||| | |||| || | ||| |||||||||| | ||||||
Sbjct 182121 AATCTTT----------------CCTCCTTAGAGAATATACGGTATTAGCATCTGTTTCC 182078
Query 247 AAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTAA 306
||| |||||||| |||| ||| || || | |||||||||||||||||| |||||| |
Sbjct 182077 AAATGTTATTCCGTACTGATAGGTAGATT-CCCACGTGTTACTCACCCGTTTGCCACTCA 182019
Query 307 GCTATATATCCAGCAAGC 324
||| | | |||||||
Sbjct 182018 -CTAAAATTGGAGCAAGC 182002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 998387510016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |