Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1106 96.9 4e-18 seq1078 96.9 4e-18 seq1034 96.9 4e-18 seq831 96.9 4e-18 seq814 96.9 4e-18 seq710 96.9 4e-18 seq677 96.9 4e-18 seq532 96.9 4e-18 seq431 96.9 4e-18 seq295 96.9 4e-18 seq196 96.9 4e-18 seq165 96.9 4e-18 seq162 96.9 4e-18 seq118 96.9 4e-18 seq68 96.9 4e-18 seq27 96.9 4e-18 seq426 89.7 6e-16 >seq1106 Length=1521 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 1466 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 1407 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 1406 ATTTACTCAAAGTAA 1392 >seq1078 Length=2075 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 1787 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 1846 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 1847 ATTTACTCAAAGTAA 1861 >seq1034 Length=2333 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 1833 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 1892 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 1893 ATTTACTCAAAGTAA 1907 >seq831 Length=5161 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 4430 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 4371 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 4370 ATTTACTCAAAGTAA 4356 >seq814 Length=6196 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 6033 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 5974 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 5973 ATTTACTCAAAGTAA 5959 >seq710 Length=6353 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 310 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 251 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 250 ATTTACTCAAAGTAA 236 >seq677 Length=6879 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 1142 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTANGCCTGCTTTGAACACTCTA 1201 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 1202 ATTTACTCAAAGTAA 1216 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 4676 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 4735 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 4736 ATTTACTCAAAGTAA 4750 >seq532 Length=7056 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 5537 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 5596 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 5597 ATTTACTCAAAGTAA 5611 >seq431 Length=7111 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 2245 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 2304 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 2305 ATTTACTCAAAGTAA 2319 >seq295 Length=14263 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 3606 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 3547 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 3546 ATTTACTCAAAGTAA 3532 >seq196 Length=39910 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 468 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 409 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 408 ATTTACTCAAAGTAA 394 >seq165 Length=45508 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 34557 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 34616 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 34617 ATTTACTCAAAGTAA 34631 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 40295 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 40354 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 40355 ATTTACTCAAAGTAA 40369 >seq162 Length=49623 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 40803 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 40744 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 40743 ATTTACTCAAAGTAA 40729 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 47608 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 47549 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 47548 ATTTACTCAAAGTAA 47534 Score = 75.2 bits (82), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTC-GGGCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| |||||| |||||||||||| Sbjct 46152 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGC-TTGAACACTCTA 46094 Query 92 ATT 94 ||| Sbjct 46093 ATT 46091 >seq118 Length=164916 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 144316 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 144257 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 144256 ATTTACTCAAAGTAA 144242 >seq68 Length=669586 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 576451 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 576510 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 576511 ATTTACTCAAAGTAA 576525 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 578277 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 578336 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 578337 ATTTACTCAAAGTAA 578351 >seq27 Length=1567171 Score = 96.9 bits (106), Expect = 4e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91 ||||||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct 783607 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 783548 Query 92 ATTTTCTCAAGGTAA 106 |||| ||||| |||| Sbjct 783547 ATTTACTCAAAGTAA 783533 >seq426 Length=7209 Score = 89.7 bits (98), Expect = 6e-16 Identities = 67/76 (88%), Gaps = 2/76 (3%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAG-CCTGCTTTGAACACTCT 90 ||||||| | ||||||||||||||||||||| | |||| || ||||||||||||||||| Sbjct 6153 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTCAGGCCTGCTTTGAACACTCT 6094 Query 91 AATTTTCTCAAGGTAA 106 ||||| ||||| |||| Sbjct 6093 AATTTACTCAAAGTAA 6078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595192786734