Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq1106 96.9 4e-18
seq1078 96.9 4e-18
seq1034 96.9 4e-18
seq831 96.9 4e-18
seq814 96.9 4e-18
seq710 96.9 4e-18
seq677 96.9 4e-18
seq532 96.9 4e-18
seq431 96.9 4e-18
seq295 96.9 4e-18
seq196 96.9 4e-18
seq165 96.9 4e-18
seq162 96.9 4e-18
seq118 96.9 4e-18
seq68 96.9 4e-18
seq27 96.9 4e-18
seq426 89.7 6e-16
>seq1106
Length=1521
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 1466 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 1407
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 1406 ATTTACTCAAAGTAA 1392
>seq1078
Length=2075
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 1787 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 1846
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 1847 ATTTACTCAAAGTAA 1861
>seq1034
Length=2333
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 1833 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 1892
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 1893 ATTTACTCAAAGTAA 1907
>seq831
Length=5161
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 4430 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 4371
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 4370 ATTTACTCAAAGTAA 4356
>seq814
Length=6196
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 6033 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 5974
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 5973 ATTTACTCAAAGTAA 5959
>seq710
Length=6353
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 310 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 251
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 250 ATTTACTCAAAGTAA 236
>seq677
Length=6879
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 1142 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTANGCCTGCTTTGAACACTCTA 1201
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 1202 ATTTACTCAAAGTAA 1216
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 4676 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 4735
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 4736 ATTTACTCAAAGTAA 4750
>seq532
Length=7056
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 5537 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 5596
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 5597 ATTTACTCAAAGTAA 5611
>seq431
Length=7111
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 2245 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 2304
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 2305 ATTTACTCAAAGTAA 2319
>seq295
Length=14263
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 3606 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 3547
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 3546 ATTTACTCAAAGTAA 3532
>seq196
Length=39910
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 468 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 409
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 408 ATTTACTCAAAGTAA 394
>seq165
Length=45508
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 34557 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 34616
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 34617 ATTTACTCAAAGTAA 34631
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 40295 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 40354
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 40355 ATTTACTCAAAGTAA 40369
>seq162
Length=49623
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 40803 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 40744
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 40743 ATTTACTCAAAGTAA 40729
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 47608 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 47549
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 47548 ATTTACTCAAAGTAA 47534
Score = 75.2 bits (82), Expect = 1e-11
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTC-GGGCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||| ||||||||||||
Sbjct 46152 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGC-TTGAACACTCTA 46094
Query 92 ATT 94
|||
Sbjct 46093 ATT 46091
>seq118
Length=164916
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 144316 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 144257
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 144256 ATTTACTCAAAGTAA 144242
>seq68
Length=669586
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 576451 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 576510
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 576511 ATTTACTCAAAGTAA 576525
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 578277 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 578336
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 578337 ATTTACTCAAAGTAA 578351
>seq27
Length=1567171
Score = 96.9 bits (106), Expect = 4e-18
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTA 91
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 783607 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTAGGCCTGCTTTGAACACTCTA 783548
Query 92 ATTTTCTCAAGGTAA 106
|||| ||||| ||||
Sbjct 783547 ATTTACTCAAAGTAA 783533
>seq426
Length=7209
Score = 89.7 bits (98), Expect = 6e-16
Identities = 67/76 (88%), Gaps = 2/76 (3%)
Strand=Plus/Minus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAG-CCTGCTTTGAACACTCT 90
||||||| | ||||||||||||||||||||| | |||| || |||||||||||||||||
Sbjct 6153 GTCCTATCGTGTTATTCCATGCTAATGTATTCAGAGCGTCAGGCCTGCTTTGAACACTCT 6094
Query 91 AATTTTCTCAAGGTAA 106
||||| ||||| ||||
Sbjct 6093 AATTTACTCAAAGTAA 6078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595192786734
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |