Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq16 120 5e-25
>seq16
Length=2066233
Score = 120 bits (132), Expect = 5e-25
Identities = 164/224 (73%), Gaps = 4/224 (2%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||| ||||||| ||||| ||||||| | | |||||| |||||||||| |||||||
Sbjct 938110 CCCA-GCTTTCGTCTCTCAGTGTCAGTTTCGGCCCAGCAGAGCGCCTTCGCCTCTGGTGT 938052
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|| ||| || |||||||||||||||||| ||| ||| |||| ||||||| | | ||
Sbjct 938051 TCTTCCAAATCTCTACGCATTTCACCGCTCCACTTGGAGTTCCCTCTGCCTCTACCGTAC 937992
Query 121 TCAAGAAAAACAGT-TTCAAATGCAGGCTATGGGTTGAGCCCATAGT-TTTCACATCTGA 178
||||| ||| || ||||| | |||||||||| | || ||| |||| ||
Sbjct 937991 TCAAGCTCGTGAGTGCTCTAATGCCGATCCAAGGTTGAGCCC-TGGTATTTGACATTAGA 937933
Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGA 222
||| | || |||||| | |||||| |||||| | ||||||
Sbjct 937932 CTTTACGAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGA 937889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828789955721
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |