Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1078 143 3e-32 seq1034 143 3e-32 seq814 143 3e-32 seq710 143 3e-32 seq677 143 3e-32 seq295 143 3e-32 seq196 143 3e-32 seq165 143 3e-32 seq162 143 3e-32 seq118 143 3e-32 seq68 143 3e-32 seq27 143 3e-32 seq426 138 1e-30 seq431 136 4e-30 seq1106 98.7 1e-18 seq532 96.9 4e-18 seq13 93.3 4e-17 seq831 87.8 2e-15 >seq1078 Length=2075 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 1861 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 1802 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 1801 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 1746 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 1745 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 1689 >seq1034 Length=2333 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 1907 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 1848 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 1847 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 1792 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 1791 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 1735 >seq814 Length=6196 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 5959 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 6018 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 6019 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 6074 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 6075 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 6131 >seq710 Length=6353 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 236 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 295 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 296 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 351 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 352 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 408 >seq677 Length=6879 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 4750 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 4691 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 4690 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 4635 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 4634 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 4578 Score = 140 bits (154), Expect = 3e-31 Identities = 140/177 (79%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||| | |||| |||||||||| |||||| Sbjct 1216 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCNTACGCTCTGAATACATTAGCATGGA 1157 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 1156 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 1101 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 1100 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 1044 >seq295 Length=14263 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 3532 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 3591 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 3592 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 3647 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 3648 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 3704 >seq196 Length=39910 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 394 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 453 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 454 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 509 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 510 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 566 >seq165 Length=45508 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 34631 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 34572 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 34571 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 34516 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 34515 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 34459 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 40369 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 40310 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 40309 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 40254 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 40253 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 40197 Score = 80.6 bits (88), Expect = 3e-13 Identities = 99/132 (75%), Gaps = 5/132 (4%) Strand=Plus/Minus Query 58 ATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC 117 |||| ||| |||||||||| | ||||||| | ||| | ||| || | | |||| Sbjct 6408 ATAC-TTAGCATGGAATAACACGATAGGACTCTGGCCTCTCTGTTG---GTCTGTGGGAC 6353 Query 118 CGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAA 177 || |||||||| || | || |||||||||| | |||||| |||||| |||||||| Sbjct 6352 CGGA-GTAATGATTAAGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAA 6294 Query 178 TTCTTGGATTTA 189 |||||||||||| Sbjct 6293 TTCTTGGATTTA 6282 >seq162 Length=49623 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 40729 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 40788 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 40789 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 40844 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 40845 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 40901 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 47534 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 47593 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 47594 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 47649 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 47650 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 47706 Score = 123 bits (136), Expect = 3e-26 Identities = 130/165 (79%), Gaps = 6/165 (4%) Strand=Plus/Plus Query 26 AATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATAG 84 |||||||| |||||| |||||||| |||| |||||||||| |||||||||| | |||| Sbjct 46091 AATTAGAGTGTTCAA-GCAGGCCTACGCTCTGAATACATTAGCATGGAATAACACGATAG 46149 Query 85 GACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTC 144 ||| | | |||| | || ||| | | |||||| |||||||| || | || ||||| Sbjct 46150 GACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTAAGAGGGGTAGTC 46205 Query 145 GGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 ||||| | |||||| |||||| |||||||||||||||||||| Sbjct 46206 GGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 46250 >seq118 Length=164916 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 144242 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 144301 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 144302 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 144357 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 144358 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 144414 >seq68 Length=669586 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 576525 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 576466 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 576465 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 576410 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 576409 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 576353 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 578351 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 578292 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 578291 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 578236 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 578235 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 578179 >seq27 Length=1567171 Score = 143 bits (158), Expect = 3e-32 Identities = 141/177 (80%), Gaps = 5/177 (3%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 783533 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 783592 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | |||| | || ||| | | |||||| |||||||| | Sbjct 783593 ATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATTA 783648 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 783649 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 783705 >seq426 Length=7209 Score = 138 bits (152), Expect = 1e-30 Identities = 141/178 (79%), Gaps = 6/178 (3%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTC-GAATACATTACCATGG 71 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| ||||| Sbjct 6078 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTGACGCTCTGAATACATTAGCATGG 6137 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 ||||| | ||||||| | | |||| | || ||| | | |||||| |||||||| Sbjct 6138 AATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGGACCGGA-GTAATGATT 6193 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 || | || |||||||||| | |||||| |||||| |||||||||||||||||||| Sbjct 6194 AAGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTA 6251 >seq431 Length=7111 Score = 136 bits (150), Expect = 4e-30 Identities = 140/177 (79%), Gaps = 6/177 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 2319 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 2260 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | ||| | ||| ||| | | |||||| |||||||| | Sbjct 2259 ATAACACGATAGGAC--TCTGGCCTA-TCTGTTGGTCTGTGGGACCG-GAGTAATGATTA 2204 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | | || |||||||||| | |||||| |||||| ||||| |||||||||||||| Sbjct 2203 AGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTG-AATTCTTGGATTTA 2148 >seq1106 Length=1521 Score = 98.7 bits (108), Expect = 1e-18 Identities = 105/134 (78%), Gaps = 5/134 (4%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 1392 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 1451 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | ||| | ||| ||| | | |||||| |||||||| | Sbjct 1452 ATAACACGATAGGAC--TCTGGCCTA-TCTGTTGGTCTGTGGGACCG-GAGTAATGATTA 1507 Query 133 ATACGGATAGTCGG 146 | | || ||||||| Sbjct 1508 AGAGGGGTAGTCGG 1521 >seq532 Length=7056 Score = 96.9 bits (106), Expect = 4e-18 Identities = 104/133 (78%), Gaps = 5/133 (4%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 5611 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 5552 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | ||||||| | | ||| | ||| ||| | | |||||| |||||||| | Sbjct 5551 ATAACACGATAGGAC--TCTGGCCTA-TCTGTTGGTCTGTGGGACCG-GAGTAATGATTA 5496 Query 133 ATACGGATAGTCG 145 | | || |||||| Sbjct 5495 AGAGGGGTAGTCG 5483 >seq13 Length=2129673 Score = 93.3 bits (102), Expect = 4e-17 Identities = 103/134 (77%), Gaps = 4/134 (3%) Strand=Plus/Minus Query 56 GAATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGG 115 |||||||||| |||||||||| | ||||||| | | |||| | || ||| | | || Sbjct 363825 GAATACATTAGCATGGAATAACACGATAGGACT--CTGGCCTATCT-GTTGGTCTGTGGG 363769 Query 116 ACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGA 175 |||| |||||||| || | || |||||||||| | |||||| |||||| |||||| Sbjct 363768 ACCGGA-GTAATGATTAAGAGGGGTAGTCGGGGGCATTCGTATTCCGTTGTCAGAGGTGA 363710 Query 176 AATTCTTGGATTTA 189 ||||||||||| || Sbjct 363709 AATTCTTGGATNTA 363696 >seq831 Length=5161 Score = 87.8 bits (96), Expect = 2e-15 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 ||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||| Sbjct 4356 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAGGCCTACGCTCTGAATACATTAGCATGGA 4415 Query 73 ATAATAGAATAGGAC 87 |||| | ||||||| Sbjct 4416 ATAACACGATAGGAC 4430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511993795040