Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq18 93.3 7e-17
seq54 78.8 1e-12
>seq18
Length=1986213
Score = 93.3 bits (102), Expect = 7e-17
Identities = 73/86 (85%), Gaps = 1/86 (1%)
Strand=Plus/Plus
Query 184 CGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTA 243
|||| |||||||| ||| ||| || |||||||||||||||||||||| |||| |||||||
Sbjct 1796689 CGTT-TGAACCCACCTCACGTACCACTTTAATGGGCGAACAGCCCAAACCTTCGGACCTA 1796747
Query 244 CTTCAGCCCCAGGATGAGACGAGCCG 269
|| ||| | |||||| || ||||||
Sbjct 1796748 CTACAGACGGAGGATGTGATGAGCCG 1796773
>seq54
Length=968918
Score = 78.8 bits (86), Expect = 1e-12
Identities = 57/66 (86%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 84 GGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATT 143
||| |||||||||| ||||| | ||||||||||||||||| | ||| |||||||||| |
Sbjct 595746 GGTCCACCAGAGGTACGTCCACCTCGGTCCTCTCGTACTAAAGGCAGATCCTCTCAAACT 595805
Query 144 TCCTAC 149
||||||
Sbjct 595806 TCCTAC 595811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780790537436
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |