Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01002055.1
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
seq3 80.6 4e-13
>seq3
Length=2777111
Score = 80.6 bits (88), Expect = 4e-13
Identities = 101/136 (74%), Gaps = 2/136 (1%)
Strand=Plus/Minus
Query 128 TGCCCACTCGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTAC 187
|||||| ||||||||||| ||| || | |||||| || | ||||||||||| |
Sbjct 1441516 TGCCCAGCCGCTTCATGCGCCGTTTGCCCTCTTTTTGCCGGTCCAAAAGCTTGCGCTTCC 1441457
Query 188 GGCTTACGTCACCGCCGTAGCATTTGGCCAGT-ACGTTCTTTCTGAGAGCCTTGACGGAG 246
|| | ||||| || |||||||| |||| |||| |||||||| | || ||||||| |
Sbjct 1441456 GGGTCACGTCGCCACCGTAGCACTTGG-CAGTCACGTTCTTACGAAGCGCCTTGAGCGTC 1441398
Query 247 GTCCGCGCAATGATCT 262
||||| |||||||
Sbjct 1441397 TCACGCGCGATGATCT 1441382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 838389511616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |