Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq3 80.6 4e-13 >seq3 Length=2777111 Score = 80.6 bits (88), Expect = 4e-13 Identities = 101/136 (74%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 128 TGCCCACTCGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTAC 187 |||||| ||||||||||| ||| || | |||||| || | ||||||||||| | Sbjct 1441516 TGCCCAGCCGCTTCATGCGCCGTTTGCCCTCTTTTTGCCGGTCCAAAAGCTTGCGCTTCC 1441457 Query 188 GGCTTACGTCACCGCCGTAGCATTTGGCCAGT-ACGTTCTTTCTGAGAGCCTTGACGGAG 246 || | ||||| || |||||||| |||| |||| |||||||| | || ||||||| | Sbjct 1441456 GGGTCACGTCGCCACCGTAGCACTTGG-CAGTCACGTTCTTACGAAGCGCCTTGAGCGTC 1441398 Query 247 GTCCGCGCAATGATCT 262 ||||| ||||||| Sbjct 1441397 TCACGCGCGATGATCT 1441382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838389511616