Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq29 257 4e-66
>seq29
Length=1535765
Score = 257 bits (284), Expect = 4e-66
Identities = 297/399 (74%), Gaps = 17/399 (4%)
Strand=Plus/Minus
Query 17 AGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCC 76
|||||||| |||| ||||||| || |||| ||||||||| |||||||||| |||||||||
Sbjct 182326 AGGCCTTCATCATTCACGCGGTATTGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCC 182267
Query 77 CCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCC 136
||||||||||||| ||||||||||||| ||||| ||||| |||||||||||| ||||||
Sbjct 182266 CCACTGCTGCCTCTCGTAGGAGTCTGGGCCGTGATTCAGTCCCAGTGTGGCTGATCATCC 182207
Query 137 TCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCC 196
|||||||||||||| |||||| | || ||| ||||||||||| ||||||| ||||||
Sbjct 182206 TCTCAGACCAGCTAAAGATCGTAGGCTTGGTAGGCCATTACCCTACCAACTACCTAATCT 182147
Query 197 CATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACGTT 256
||| ||||| || || | || ||||| || | || |
Sbjct 182146 TGCGCGGGCTCATCTATCAGCGATA------AA--------TCTTTCCTCCTTAGAGAAT 182101
Query 257 ATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGACA 316
|| |||||||||| | ||||||| ||||| || | ||| || ||||||
Sbjct 182100 ATACGGTATTAGCATCTGTTTCCAAATGTTATTCCGTACTGATAGGTAGATTCCCACGTG 182041
Query 317 TTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGC-TTCCTGTTACCGTTCGA 375
|||||||||||| ||||||| | | ||||||| | | |||| |||||||
Sbjct 182040 TTACTCACCCGTTTGCCACTCACTAAAATTGGAGCAAGCCCCAATTTTGTT--CGTTCGA 181983
Query 376 CTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
||||||||||||| || | |||||||||||| ||||||
Sbjct 181982 CTTGCATGTGTTAAGCATACCGCCAGCGTTCGTTCTGAG 181944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1222384707776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |