Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20 2010-07-08] 1,251 sequences; 137,684,403 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq29 205 3e-50 >seq29 Length=1535765 Score = 205 bits (226), Expect = 3e-50 Identities = 158/188 (84%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 158 CCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCG 217 |||||| |||||| ||||||||| ||||| ||| ||||||| | |||||| |||| | Sbjct 182139 CCCGCGCAAGATTAGGTAGTTGGTAGGGTAATGGCCTACCAAGCCTACGATCTTTAGCTG 182198 Query 218 ACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGC 277 |||||||| ||||| |||||| ||| ||||| ||||| ||| ||||||||| ||||| Sbjct 182199 GTCTGAGAGGATGATCAGCCACACTGGGACTGAATCACGGCCCAGACTCCTACGAGAGGC 182258 Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 ||||||||||||||||| ||||||||| |||||||||| |||||| |||||||| ||| Sbjct 182259 AGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAATACCGCGTGAATGAT 182318 Query 338 GAAGGCCT 345 |||||||| Sbjct 182319 GAAGGCCT 182326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497581265024