Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq16 219 1e-54
>seq16
Length=2066233
Score = 219 bits (242), Expect = 1e-54
Identities = 254/341 (74%), Gaps = 10/341 (3%)
Strand=Plus/Plus
Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128
|||||||| | ||||||||||| || |||||||| | | ||||| | || ||| |
Sbjct 937889 TCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTCGTAAAGTCTAATGTCAAATACC 937948
Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAA-ACTGCAGGGCTAGAGTGCAGGAGGGGCAAGT 187
| ||||||||| || | || || || ||| | ||| |||| | | || ||||
Sbjct 937949 AGGGCTCAACCTTGGATCGGCATTAGAGCACTCACGAGCTTGAGTACGGTAGAGGCAGAG 938008
Query 188 GGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGC 247
|||| ||| |||| |||||||||||||||||| ||| ||| ||||||||| |||||||||
Sbjct 938009 GGAACTCCAAGTGGAGCGGTGAAATGCGTAGAGATTTGGAAGAACACCAGAGGCGAAGGC 938068
Query 248 GGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGA 307
| |||||| | | ||||||||||||| ||||||| ||||||| || |||||||||
Sbjct 938069 GCTCTGCTGGGCCGAAACTGACACTGAGAGACGAAAGCTGGGGGAGCGAATAGGATTAGA 938128
Query 308 TACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCC 367
|||||| ||||||| ||||||||| ||| | |||| ||| | || ||| |
Sbjct 938129 TACCCTAGTAGTCCCAGCCGTAAACTATGGAGACTAAGTGCTGCCGC----AAG-----C 938179
Query 368 GGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
|||| | ||| ||||| ||||| | || |||||||||||
Sbjct 938180 AGTGCTGTAGCTAACGCGTTAAGTCTCCCGCCTGGGGAGTA 938220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203184947968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |