Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq295 343 3e-92
seq677 342 1e-91
seq165 342 1e-91
seq162 342 1e-91
seq128 342 1e-91
seq118 342 1e-91
seq13 342 1e-91
seq951 338 1e-90
seq947 338 1e-90
seq68 338 1e-90
seq1056 336 4e-90
seq50 333 5e-89
seq1033 214 3e-53
seq196 178 2e-42
seq796 158 2e-36
seq26 113 9e-23
seq56 104 4e-20
>seq295
Length=14263
Score = 343 bits (380), Expect = 3e-92
Identities = 264/310 (85%), Gaps = 4/310 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 6707 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACNTGCGGTGCGCAGACTTCTTAG 6766
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 6767 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 6826
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 6827 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCC 6884
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | |||||||||||| || | | |||||| |||||||||| ||||||||||||
Sbjct 6885 GAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATT 6943
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 6944 AGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCT 7003
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 7004 GCCCTTTGTA 7013
Score = 289 bits (320), Expect = 5e-76
Identities = 217/251 (86%), Gaps = 4/251 (2%)
Strand=Plus/Plus
Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137
|||||||||| ||| | |||| |||||||| |||||| ||| |||||||||||||||
Sbjct 5679 GAGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATACAGGGTCTGTGATGCCCT 5738
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197
|||||||||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct 5739 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGC 5796
Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257
|| ||| | |||||||||||| || | | |||||| |||||||||| |||||||||||
Sbjct 5797 CGAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTAT 5855
Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317
| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 5856 TAGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCC 5915
Query 318 TGCCCTTTGTA 328
|||||||||||
Sbjct 5916 TGCCCTTTGTA 5926
>seq677
Length=6879
Score = 342 bits (378), Expect = 1e-91
Identities = 264/310 (85%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 639 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 580
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 579 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 520
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 519 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCC 462
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | |||||||||||| || | | |||||| |||||||||| ||||||||||||
Sbjct 461 GAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATT 403
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 402 AGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCT 343
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 342 GCCCTTTGTA 333
>seq165
Length=45508
Score = 342 bits (378), Expect = 1e-91
Identities = 264/310 (85%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 4811 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 4752
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 4751 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 4692
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 4691 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCC 4634
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | |||||||||||| || | | |||||| |||||||||| ||||||||||||
Sbjct 4633 GAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATT 4575
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 4574 AGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCT 4515
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 4514 GCCCTTTGTA 4505
Score = 342 bits (378), Expect = 1e-91
Identities = 264/310 (85%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 5877 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 5818
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 5817 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 5758
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 5757 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCC 5700
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | |||||||||||| || | | |||||| |||||||||| ||||||||||||
Sbjct 5699 GAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATT 5641
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 5640 AGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCT 5581
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 5580 GCCCTTTGTA 5571
Score = 342 bits (378), Expect = 1e-91
Identities = 264/310 (85%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 32671 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 32612
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 32611 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 32552
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 32551 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCC 32494
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | |||||||||||| || | | |||||| |||||||||| ||||||||||||
Sbjct 32493 GAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATT 32435
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 32434 AGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCT 32375
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 32374 GCCCTTTGTA 32365
Score = 96.9 bits (106), Expect = 7e-18
Identities = 88/110 (80%), Gaps = 1/110 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 34054 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 33995
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128
||||||||| ||| | |||| |||||||| |||||| ||||||||||||
Sbjct 33994 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTG 33945
Score = 96.9 bits (106), Expect = 7e-18
Identities = 88/110 (80%), Gaps = 1/110 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 39792 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 39733
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128
||||||||| ||| | |||| |||||||| |||||| ||||||||||||
Sbjct 39732 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTG 39683
>seq162
Length=49623
Score = 342 bits (378), Expect = 1e-91
Identities = 264/310 (85%), Gaps = 4/310 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 48111 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 48170
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 48171 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 48230
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 48231 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCC 48288
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | |||||||||||| || | | |||||| |||||||||| ||||||||||||
Sbjct 48289 GAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATT 48347
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 48348 AGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCT 48407
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 48408 GCCCTTTGTA 48417
Score = 324 bits (358), Expect = 3e-86
Identities = 254/300 (85%), Gaps = 4/300 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 46655 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 46714
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 46715 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 46774
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 46775 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCC 46832
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | |||||||||||| || | | |||||| |||||||||| ||||||||||||
Sbjct 46833 GAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATT 46891
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 46892 AGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCT 46951
>seq128
Length=133146
Score = 342 bits (378), Expect = 1e-91
Identities = 264/310 (85%), Gaps = 4/310 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 131099 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 131158
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 131159 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 131218
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 131219 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCC 131276
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | |||||||||||| || | | |||||| |||||||||| ||||||||||||
Sbjct 131277 GAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATT 131335
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 131336 AGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCT 131395
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 131396 GCCCTTTGTA 131405
>seq118
Length=164916
Score = 342 bits (378), Expect = 1e-91
Identities = 264/310 (85%), Gaps = 4/310 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 144819 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 144878
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 144879 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 144938
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 144939 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCC 144996
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | |||||||||||| || | | |||||| |||||||||| ||||||||||||
Sbjct 144997 GAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATT 145055
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 145056 AGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCT 145115
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 145116 GCCCTTTGTA 145125
>seq13
Length=2129673
Score = 342 bits (378), Expect = 1e-91
Identities = 264/310 (85%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 363291 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 363232
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 363231 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 363172
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 363171 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCC 363114
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | |||||||||||| || | | |||||| |||||||||| ||||||||||||
Sbjct 363113 GAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATT 363055
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 363054 AGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCT 362995
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 362994 GCCCTTTGTA 362985
>seq951
Length=2489
Score = 338 bits (374), Expect = 1e-90
Identities = 263/310 (85%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 826 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 767
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| | ||||||||||||||||||||
Sbjct 766 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGAAAACAGGTCTGTGATGCCCTT 707
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 706 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCC 649
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | |||||||||||| || | | |||||| |||||||||| ||||||||||||
Sbjct 648 GAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATT 590
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 589 AGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCT 530
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 529 GCCCTTTGTA 520
>seq947
Length=2738
Score = 338 bits (374), Expect = 1e-90
Identities = 263/310 (85%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 2378 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 2319
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 2318 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 2259
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 2258 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCC 2201
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | |||||||||||| || | | |||||| |||||||||| ||||||||||||
Sbjct 2200 GAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATT 2142
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||
Sbjct 2141 AGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAACTCGCGTTGATTACGTCCCT 2082
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 2081 GCCCTTTGTA 2072
>seq68
Length=669586
Score = 338 bits (374), Expect = 1e-90
Identities = 262/308 (85%), Gaps = 4/308 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 575948 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 575889
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 575888 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 575829
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 575828 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCC 575771
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | |||||||||||| || | | |||||| |||||||||| ||||||||||||
Sbjct 575770 GAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATT 575712
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 575711 AGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCT 575652
Query 319 GCCCTTTG 326
||||||||
Sbjct 575651 GCCCTTTG 575644
>seq1056
Length=2102
Score = 336 bits (372), Expect = 4e-90
Identities = 264/311 (85%), Gaps = 5/311 (2%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 361 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 302
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 301 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 242
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||||| | | ||||||||
Sbjct 241 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAG--CCTATCCTTGGCC 184
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| | ||||||||||| ||||| |||||| |||||||||| ||||||||||||
Sbjct 183 GAGAGGCCCGGGTAATCTTG-TAAACCGCGTCGTGATGGGGATAGATTATTGCAATTATT 125
Query 259 GCTCTTCAACGAGG-AATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317
|||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 124 AGTCTTCAACGAGGAAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCC 65
Query 318 TGCCCTTTGTA 328
|||||||||||
Sbjct 64 TGCCCTTTGTA 54
>seq50
Length=1026462
Score = 333 bits (368), Expect = 5e-89
Identities = 260/307 (85%), Gaps = 4/307 (1%)
Strand=Plus/Plus
Query 23 CGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGG 82
|||||||| | |||||||||||| ||| ||| |||| ||| | |||||||||||
Sbjct 277294 CGAGACCTGAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAGAGG 277353
Query 83 GACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGA 141
|||||| ||| | |||| |||||||| |||||| |||||||||||||||||||||||||
Sbjct 277354 GACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTTAGA 277413
Query 142 TGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGA 201
|||||||||||||||||||||||||||||| |||||||| ||| ||||||||
Sbjct 277414 TGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAGCCTATC--CTTGGCCGAG 277471
Query 202 AGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCT 261
||| | |||||||||||| || | | |||||| |||||||||| |||||||||||| |
Sbjct 277472 AGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATTAGT 277530
Query 262 CTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCC 321
||||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||
Sbjct 277531 CTTCAACGAGGAATGCCCAGTAAGCGCGAGTCATCAGCTCGCGTTGATTATGTCCCTGCC 277590
Query 322 CTTTGTA 328
|||||||
Sbjct 277591 CTTTGTA 277597
>seq1033
Length=2159
Score = 214 bits (236), Expect = 3e-53
Identities = 165/191 (86%), Gaps = 5/191 (3%)
Strand=Plus/Minus
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197
||||||||||||||||| |||||||||||||||| | | | ||||| ||| ||||||
Sbjct 2158 TAGATGTTCTGGGCCGC-CGCGCGCTACACTGAC-GCGACCACGAGCCTATC--CTTGGC 2103
Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257
|| ||| | |||||||||||| || | | |||||| |||||||||| |||||||||||
Sbjct 2102 CGAGAGGCCCGGGTAATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTAT 2044
Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317
| |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||
Sbjct 2043 TAGTCTTCAACGAGGAATGTCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCC 1984
Query 318 TGCCCTTTGTA 328
|||||||||||
Sbjct 1983 TGCCCTTTGTA 1973
>seq196
Length=39910
Score = 178 bits (196), Expect = 2e-42
Identities = 139/165 (84%), Gaps = 1/165 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||| ||| |||| ||| | ||||||||
Sbjct 971 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 1030
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||
Sbjct 1031 AGGGACTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTT 1090
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG 183
||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1091 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCGACCAACGAG 1135
Score = 82.4 bits (90), Expect = 1e-13
Identities = 52/55 (95%), Gaps = 1/55 (2%)
Strand=Plus/Plus
Query 274 ATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 3428 ATGCCTAGTA-GCGCGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 3481
>seq796
Length=6210
Score = 158 bits (174), Expect = 2e-36
Identities = 106/117 (91%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 212 AATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAG 271
|||||||| || | | |||||| |||||||||| |||||||||||| |||||||||||
Sbjct 794 AATCTTGTAAACCGC-GTCGTGATGGGGATAGATTATTGCAATTATTAGTCTTCAACGAG 736
Query 272 GAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 735 GAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 679
>seq26
Length=1578460
Score = 113 bits (124), Expect = 9e-23
Identities = 107/135 (79%), Gaps = 4/135 (3%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | ||||||| |||| ||| ||| |||| ||| | ||||||||
Sbjct 1214219 GAACGAGACCTGAGCCTGCTAGATAGTCAGCATCGCACCTGCGGTGCGCAGACTTCTTAG 1214160
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGC---AATAACAGGTCTGTGATGCC 135
||||||||| ||| | |||| |||||||| ||||| || |||||||||||||||||
Sbjct 1214159 AGGGACTATTGGCGTTCAGCCAATGGAAGTACGAGGCGATAACAACAGGTCTGTGATGCC 1214100
Query 136 CTTAGATGTTCTGGG 150
|||||||||||| ||
Sbjct 1214099 CTTAGATGTTCTAGG 1214085
>seq56
Length=912469
Score = 104 bits (114), Expect = 4e-20
Identities = 148/201 (74%), Gaps = 12/201 (6%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGC-CGGCTTCTTA 78
|| |||||| | ||||||||| |||| ||| || || | || | ||| |||
Sbjct 789606 GAACGAGACGTCAACCTGCTACATAGACAGCATTGCACCTGCAGCGTGCACATCTT-TTA 789664
Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137
|| ||||| ||| | ||| |||||||| |||||| |||||||||||||||||| ||
Sbjct 789665 GAAGGACTCCTGGCATTTAGCGAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCGCT 789724
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197
| |||||||||||||||||||||||| | | || || |||| | | |||||||
Sbjct 789725 TTGATGTTCTGGGCCGCACGCGCGCT-CGC-GA-----TCAGCGAG--CCTATCCTTGGC 789775
Query 198 CGGAAGGTCTGGGTAATCTTG 218
|| ||| | |||||||||||
Sbjct 789776 CGAGAGGCCCGGGTAATCTTG 789796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947188150528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |