Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq29 161 2e-37
>seq29
Length=1535765
Score = 161 bits (178), Expect = 2e-37
Identities = 184/245 (75%), Gaps = 9/245 (4%)
Strand=Plus/Minus
Query 69 TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGC 128
||||| |||| ||||| |||||| ||| |||||||| ||||||| | ||
Sbjct 182350 TTATTTCCTT-TAAAAAAAGTTTT-------TAGG-CCTTCATCATTCACGCGGTATTGC 182300
Query 129 TGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGG 188
||| |||| || ||| |||||| |||||||||| |||||||||||| ||||||||| |||
Sbjct 182299 TGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCTCGTAGGAGTCTGG 182240
Query 189 ACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCT 248
||||| ||||| ||| ||||| || | |||||||||| | ||| ||||||||||
Sbjct 182239 GCCGTGATTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAAAGATCGTAGGCT 182180
Query 249 AGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAA 308
||| |||| |||||| || |||||||||| ||| | |||| || |||| ||
Sbjct 182179 TGGTAGGCCATTACCCTACCAACTACCTAATCTTGCGCGGGCTCATCTATCAGCGATAAA 182120
Query 309 TCTTT 313
|||||
Sbjct 182119 TCTTT 182115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068786629312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |