Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq35 127 2e-24
seq8 100 2e-16
>seq35
Length=1396082
Score = 127 bits (140), Expect = 2e-24
Identities = 127/165 (77%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
||| || || || || ||||| ||| ||||||| ||||| || || || |||||| |
Sbjct 1360639 CATGAACAGGTCCGGAATCCAAAGGCCGTAGAACAGATCACGCGCGCGCGCCTCCTCCTT 1360698
Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459
||||||||| ||||||| || | ||||| |||| ||| |||||||| || || | |||
Sbjct 1360699 GCCGTGATTCTTGCGCAGATCCAAAAACTCGAAGACGTCCGCATGCCAGGGCTCGATGTA 1360758
Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504
||||||||| | |||| | || |||||||| || ||||| || ||
Sbjct 1360759 GATGGCGAAGGCGCCCTTGCGCTTGCCGCCGCCCTGGTCCACATA 1360803
>seq8
Length=2307048
Score = 100 bits (110), Expect = 2e-16
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 61195 TTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTA 61254
|| || ||| | |||||||| ||||| || || ||||||||||| | ||||| |
Sbjct 630937 TTTATCAAATACGTGTTGGCATTCTTCGCTGCCAGCGACGGTATCGTGATGGAGAACCTG 630996
Query 61255 TTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAG 61314
| || || ||| | ||||||||| ||| | ||||| || |||||||||||||||
Sbjct 630997 TCGGCGCGGTTCATGTCGGAGGTGCAGGTGCCTGAGGCCCGCGCATTCTACGGCTTCCAG 631056
Query 61315 ATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGT 61352
||||||||||| || || || ||||||||||| ||
Sbjct 631057 ATTGCCATGGAAAACGTGCATAGCGAGATGTACAGCGT 631094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397561938454640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |