Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14]
18,312 sequences; 192,487,774 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq14462 168 5e-37
>seq14462
Length=746139
Score = 168 bits (186), Expect = 5e-37
Identities = 555/846 (66%), Gaps = 24/846 (3%)
Strand=Plus/Plus
Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155
|||||||| ||||| || || || || ||||| | ||||| |||||| | || | |||
Sbjct 137397 ATGTACAAGAAGGCCGAGGCGTCGTTTTGGACTGCCGAGGAAGTCGATCTATCACAGGAC 137456
Query 61156 ATGAATGACTGGGAGCGTTTAT-CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214
|| |||||| |||| ||| ||| |||| ||| ||||| || ||||| || ||
Sbjct 137457 GGACGCGATTGGGAGAATTTAAACGA-CGGCGAACGACACTTCATCAAGCATGTCTTAGC 137515
Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC--GTTTCGCGCAG 61272
||||| ||||| || || || |||||| |||||| | || | | | ||| |
Sbjct 137516 CTTCTTCGCCGCCTCTGATGGCATCGTCTTGGAGAATCT--TGCATCTCGATTCATGTCC 137573
Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332
|| || || || |||||||||||| ||||||||| || || || || || |||||| |
Sbjct 137574 GATGTTCAGGTATCGGAGGCGCGTGCTTTCTACGGATTTCAAATCGCGATTGAGAATATT 137633
Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392
|| ||||||||||| ||| | || | ||||| ||||||| ||| ||| | ||
Sbjct 137634 CATTCGGAGATGTATAGTCTACTTCTTGATACCTACATCAAGGACAACAAAGAAAGAGAC 137693
Query 61393 CGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGC--GGAAAGCGGATTGGGCCT 61450
| | || || ||||| || || ||| ||| || ||||||| | |||||
Sbjct 137694 CATCTCTTTCGCGCAATCGAAACAATCCCG--TGTGTTGCCAAGAAAGCGCAATGGGCGA 137751
Query 61451 TCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGG 61510
| | ||||||| | | | | || |||| || || | | || || || |
Sbjct 137752 TGACTTGGATCGACGG---ATCTCAAACCTTTGCGGAGCGTATCGTAGCCTTCGCCTGCG 137808
Query 61511 TCGAGGGTGTATTTTTCAGTGGATCGTTT-GCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569
| || ||| | || ||| || | |||| | | || || ||| | || ||||| ||
Sbjct 137809 TTGAAGGTATCTTCTTCTCCGG-TAGTTTCTGCTCCATTTTCTGGCTTAAAAAACGAGGT 137867
Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629
|| ||||| || || |||||| ||| ||||| || ||||| ||||| ||| | |||||
Sbjct 137868 CTCATGCCTGGACTCACCTTCTCCAACGAGTTAATCTCACGAGACGAAGGCCTCCATTGC 137927
Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATC-GTCCGTCGGAGGAGCGTGT 61688
||||| ||| | |||| | ||| | || | ||| | | |||||||| ||
Sbjct 137928 GATTTCGCTTGTCTGCTCTACAA----TCTCCTGAGAACCAAATTAACAGAGGAGCGCGT 137983
Query 61689 G-GGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGC 61747
| || | || || | || || || ||||| ||| ||| || ||||| | |
Sbjct 137984 GAAGTCA-ATCGTATGCGACGCAGTGGAGATCGAGAGGGAGTTTGTGTGCGACGCGCTTC 138042
Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG 61807
| | | | | || |||||| ||| |||||| || || || ||||| || || |
Sbjct 138043 CGTGCGCGTTGGTTGGGATGAATCGTGACCTAATGAGTCAATACATCGAATTCGTAGCGG 138102
Query 61808 ACCGTCTGTT-GGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGAT 61866
| || |||| ||| || ||||| | || | ||| | | || || ||||||
Sbjct 138103 ATCGGTTGTTGGGTGCGTTAGGGTACGGTAAGG-TGTATGGTGTGTCTAATCCGTTTGAT 138161
Query 61867 TTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGAC 61926
| ||||| | ||||||||| | || || || || || |||||||| | || || ||
Sbjct 138162 TGGATGGAGCTTATTTCGCTGCAGGGTAAAACAAACTTCTTCGAGAAGAGAGTTGGAGAT 138221
Query 61927 TATCAA 61932
|| |||
Sbjct 138222 TACCAA 138227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397479271767680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |