Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14] 18,312 sequences; 192,487,774 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq12645 89.7 2e-12 >seq12645 Length=270105 Score = 89.7 bits (98), Expect = 2e-12 Identities = 135/189 (71%), Gaps = 5/189 (3%) Strand=Plus/Plus Query 159602 TCATCGTTCTCTCCCTTAACCTCATCTGTAGAGACGTGAATGAACCTCTTTAC--GGAAA 159659 |||||| ||||||| | |||||||| ||| || || || |||||| | | || | Sbjct 247881 TCATCGGTCTCTCCATAGACCTCATCGGTACTCACATGGATAAACCTCCTGATCTGGCCA 247940 Query 159660 ATTCTTTAGCACAG--TGGAGTAGGTTATGTGTGCCTACCACATTATTCATGGTAAAATC 159717 || || ||| || | || ||| ||| || || | ||||||| |||| || || Sbjct 247941 GTTACTTTGCA-AGCTTCCAGAAGGACATGGGTACCATAAATATTATTCTTGGTGAACTC 247999 Query 159718 TAGAGAGTTATCGAAAGAGTTGTCTACATGAGTGTGAGCAGCAAAGTGCATAACCGTGTC 159777 | | ||| | ||||||||||| ||||| || ||||||||||||||||||| |||||| Sbjct 248000 AAAACTATTACCAAAAGAGTTGTCCACATGGGTTTGAGCAGCAAAGTGCATAATCGTGTC 248059 Query 159778 GATCTTCTC 159786 || || || Sbjct 248060 AATGTTTTC 248068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884444163240616