Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20hypochondriacus_20[genbank_20GCA_5F000753965.1_202014- 09-10] 117,340 sequences; 502,147,592 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq4383 78.8 5e-13 >seq4383 Length=81802 Score = 78.8 bits (86), Expect = 5e-13 Identities = 95/125 (76%), Gaps = 11/125 (9%) Strand=Plus/Minus Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGA-GTCAAAATGATAACATCGCCC 60 |||||||| ||||||||||||| |||||| |||| ||| || || |||||| || Sbjct 44666 AACCCAAA-ACTTTGATTTCTCATAAGGTTCCGA-CGACATCCTAAAAGTAACATATGCC 44609 Query 61 GATCCCTAGTCGGCATAG-TTTACGG-------TTAAGACTACGACGGTATCTGATCGTC 112 ||||||| ||||||| | |||| || || |||||| |||||||||||||| || Sbjct 44608 GATCCCTGATCGGCATTGTTTTATGGTTGAGACTTGAGACTAGGACGGTATCTGATCATC 44549 Query 113 TTCGA 117 || || Sbjct 44548 TTTGA 44544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278093742600