Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20hypochondriacus_20[genbank_20GCA_5F000753965.1_202014- 09-10] 117,340 sequences; 502,147,592 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq113225 96.9 7e-18 >seq113225 Length=710 Score = 96.9 bits (106), Expect = 7e-18 Identities = 133/182 (73%), Gaps = 8/182 (4%) Strand=Plus/Plus Query 69 GCCTTTCGTGCGGGTCGGAACTTA-CCCGACAAGGAATTTCGCTACCTTAGG--ACCGTT 125 ||||||| | ||||| ||||||| |||||| ||||| || |||||||||| || ||| Sbjct 2 GCCTTTCTTTCGGGTTAGAACTTAACCCGACGAGGAAAGTCCCTACCTTAGGGGACTGTT 61 Query 126 A-TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTA----AC 180 | ||||||||||| ||||| || ||||||| || | ||| | | | || | Sbjct 62 AGTAGTTACGGCCACCGTTCACCGGGGCTTCGGTCGTCGGCTCCTCTGTCATTAGGTCGC 121 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 || |||| || ||||| ||| |||||||||||| | || ||||| ||||| ||| | Sbjct 122 CAATTTCCTTGACATTCCATCACTGGGCAGGCGTCAACCCCCATACACGGTCTTACGAGT 181 Query 241 TA 242 || Sbjct 182 TA 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1061153379840