Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20tuberculatus_20[genbank_20GCA_5F000180655.1_202009-06- 22] 15,440 sequences; 4,347,977 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq14000 226 6e-57 >seq14000 Length=18998 Score = 226 bits (250), Expect = 6e-57 Identities = 240/310 (77%), Gaps = 20/310 (6%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 14742 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 14684 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 14683 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 14624 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||||||||||||||||||||||| ||| | || | | Sbjct 14623 ACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCT 14564 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | || | |||||||| Sbjct 14563 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTTCTCAG-CCTACGGGGTATTAG 14518 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| ||||| ||| || || |||||||||| Sbjct 14517 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 14460 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 14459 GTCCGCCACT 14450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071834483200