Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20tuberculatus_20[genbank_20GCA_5F000180655.1_202009-06- 22] 15,440 sequences; 4,347,977 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq389 87.8 1e-15 >seq389 Length=5342 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 1747 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 1688 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 1687 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 1630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351949048000