Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20tuberculatus_20[genbank_20GCA_5F000180655.1_202009-06- 22] 15,440 sequences; 4,347,977 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq14000 268 2e-69 >seq14000 Length=18998 Score = 268 bits (296), Expect = 2e-69 Identities = 299/397 (75%), Gaps = 2/397 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 14811 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 14870 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || |||||||| || ||||||| | || ||| | | || Sbjct 14871 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGG 14930 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 |||||||| || || | |||||| | ||| |||| | | ||||||| ||||| Sbjct 14931 CTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 14990 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||| |||||||||||||||||| || | | |||||||| |||||| || | Sbjct 14991 TTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCT 15050 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 ||||| | | |||||||||||| ||||||| ||||||| || ||||||||||||| Sbjct 15051 GCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCC 15110 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTG 371 ||||||| ||||||||||||| |||||||| | | | ||| || | | | ||| Sbjct 15111 CAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAGTG 15169 Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | ||| ||||| ||||||| || ||||||||||| Sbjct 15170 TTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 15206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203014225920