Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq9597 246 9e-63 seq2039 134 4e-29 seq3634 127 6e-27 seq810 84.2 7e-14 seq9325 75.2 3e-11 >seq9597 Length=11437 Score = 246 bits (272), Expect = 9e-63 Identities = 199/238 (84%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 5025 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 5084 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 5085 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 5144 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | ||||| ||| || | ||||||| ||||||| ||||||||| Sbjct 5145 TTGAAAGAGAGGGGT-GCCTTC-GGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 5202 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||| ||| || ||||||||||||||||||||||||||||||||| | |||||| Sbjct 5203 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTT 5260 >seq2039 Length=86250 Score = 134 bits (148), Expect = 4e-29 Identities = 206/291 (71%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 204 AAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAA 263 ||||||| ||||||| | ||||||| | |||| |||| ||||||| || || | | Sbjct 60552 AAGTCCCACAACGAGTGTAACCCTTGTGTTTAGCTGCCCCTGTTAAGTTAGGAACCTTGA 60493 Query 264 GTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTT 323 || |||| ||| || || ||||| |||| ||| || | |||||||| |||||||| Sbjct 60492 GTAGACTATTAATGATAAGCCAGAGGAGGGTGAGGATGATGCCAAATCATTATGCCCCT- 60434 Query 324 ATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGT 383 ||| |||||| ||||| |||||| ||||||| | ||||||| ||| | || Sbjct 60433 ATGCCTTGGGCGACACATGTGCTATAATGGACGAGGCAAAGGGTCGCGGGCTTGTGAAAG 60374 Query 384 CAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGA 443 ||| || |||| ||| || || | || ||||| | || ||||| ||| |||| Sbjct 60373 TGAGCTAACCCCAAAAATCAGTCCTAAATTTAAATTGTGGGTTGTAACTCACCTACATGA 60314 Query 444 AGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTACGGTGAATACGTTC 493 || | |||||||||||||| | | |||| ||| || |||||| | ||| Sbjct 60313 AGTCGAAATCGCTAGTAATCCTTGGTCAGCCATATGACAGTGAATTCCTTC 60263 Score = 118 bits (130), Expect = 3e-24 Identities = 172/242 (71%), Gaps = 1/242 (0%) Strand=Plus/Minus Query 159 GGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAG 218 |||| |||||||||||||| ||||| | | || ||||| |||||| ||| ||| Sbjct 60252 GGTGGTGCATGGTTGTCGTTAGCTC-TTACTATAGGTGTTGTACTAAGTCTTACAATGAG 60194 Query 219 CGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGA 278 | |||| ||| | ||| |||||| | ||| || | |||||| |||||| |||| Sbjct 60193 CTCAACTCTTGTGTTTACTTGCCACAGCTGTGTTTGGAATCCTAAGTAGACTGCTAGTGA 60134 Query 279 CAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACA 338 || ||| || |||||| ||| ||| ||| || | |||||| ||||| | ||| ||| Sbjct 60133 TAAGCCGCAGAAAGGTGAGGATGACTCCAAGTCTTTATGCCCTTTATGCCCTAGGCAACA 60074 Query 339 CACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATA 398 || ||| ||||||||| |||||||| || | ||| |||| ||| || |||| | Sbjct 60073 CATGTGGTACAATGGATGGGACAAAGGGTTGCAATCCCGTGAGGGTGAGCTAACCCCAAA 60014 Query 399 AA 400 || Sbjct 60013 AA 60012 >seq3634 Length=53635 Score = 127 bits (140), Expect = 6e-27 Identities = 169/234 (72%), Gaps = 17/234 (7%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| | |||| |||||||||||||||||||||||| | ||||||| |||||| ||| Sbjct 31196 TACGGTCACAAGACTGAAACTCAAAGGAATTGACGGGGGCTTGCACAAGTGGTGGAACAT 31255 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 ||||||||||| || |||| || | |||||||||| ||||||| | ||| Sbjct 31256 GTGGTTTAATTTGATACAACACGCAAAACCTTACCAGCCCTTGACA---TATGA------ 31306 Query 121 TAGAGATAGAGGTTTCCCCTTCGG---GGGACAGAGT----GACAGGTGATGCATGGTTG 173 | | | | | ||| || || || || | ||| ||||||||||| || Sbjct 31307 -ACAACAAAACCTGTCCTTAATGGGATGGTACTGACTTTCATACAAGTGATGCATGGCTG 31365 Query 174 TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227 | |||||||||||| |||||||||| ||| |||||| || ||||| |||||| Sbjct 31366 TTGTCAGCTCGTGTTGTGAGATGTTTGGTCAAGTCCTATAATGAGCGAAACCCT 31419 Score = 127 bits (140), Expect = 6e-27 Identities = 162/225 (72%), Gaps = 16/225 (7%) Strand=Plus/Plus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||| | |||| | || ||||||||||||||| ||| |||| || |||| || Sbjct 31690 GACTGGCAGTGAAATACTGGAGGAAGGTGGGGATGACATCAAGTCTGCATGGCC------ 31743 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAA 386 |||||||||||||||||| | ||||| ||| ||| | | | || | Sbjct 31744 ---------ACACACGTGCTACAATGGCAATTACAATGGGAAGCAAGGCTGTAAGACGGA 31794 Query 387 GCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGC 446 || ||||| | |||| | || ||||||||| || ||||||| ||| | |||||| Sbjct 31795 GCGAATCC-AGAAAGATTACCTTAGTTCGGATCGTTCTCTGCAATTCGGGAACATGAAGG 31853 Query 447 TGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGT 491 ||||||||||||||||||| ||||||||||| |||||||| || Sbjct 31854 TGGAATCGCTAGTAATCGTGGATCAGCATGCCGTGGTGAATATGT 31898 >seq810 Length=230207 Score = 84.2 bits (92), Expect = 7e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 17 AAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAG 76 ||||| |||||||||| || | || ||||| |||||||||||||||||||||| || Sbjct 115998 AAACTTAAAGGAATTGGCGAAGGCCTACACAAACGGTGGAGCATGTGGTTTAATTTGACC 115939 Query 77 CAACGCGAAGAACCTTACCAAATCTTGACAT 107 |||| || | |||||||||| ||||||| Sbjct 115938 CAACACGTAAAACCTTACCAGCCTTTGACAT 115908 >seq9325 Length=11434 Score = 75.2 bits (82), Expect = 3e-11 Identities = 73/92 (79%), Gaps = 3/92 (3%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGG--GGACCCGCACAAGCGGTGGAGCATGTGG 64 ||||||| ||||||| |||||||||||||| || | | ||| || ||||||| ||||| Sbjct 7701 CGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCAC-CACCAGGAGTGGAGCCTGTGG 7643 Query 65 TTTAATTCGAAGCAACGCGAAGAACCTTACCA 96 |||||| || |||| || ||| ||||||| Sbjct 7642 CTTAATTTGACTCAACACGGGGAAACTTACCA 7611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503582354240