Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3590 158 3e-36 seq10839 134 3e-29 seq119 75.2 3e-11 seq13 73.4 9e-11 >seq3590 Length=62634 Score = 158 bits (174), Expect = 3e-36 Identities = 151/192 (79%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| |||||| |||| || ||| || ||||||| Sbjct 2162 GCTTCGGTGAATCACTTGAGCCCTTTTACATTTTCGGTGCCATGGAG---CTAGACCAGT 2218 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 2219 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 2278 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | || |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 2279 CTCGAGAACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 2338 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 2339 GTTTCCCTCTCG 2350 >seq10839 Length=6436 Score = 134 bits (148), Expect = 3e-29 Identities = 139/181 (77%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 222 ATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGTGAGCTATTAC 278 || |||| |||| |||||| |||| || ||| || ||||||||||||||||| Sbjct 5406 ATCACTTCGGCCCTTTTACATTTTCGGTGCCATGGAG---CTAGACCAGTGAGCTATTAC 5462 Query 279 GCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACA 338 || |||| ||||||||||||||||||||| |||||||||||||| ||| || Sbjct 5463 GCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCGCTCGATAACT 5522 Query 339 TCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 |||||| ||||| ||| | ||||||| ||||||| | ||| |||||| ||||||||| Sbjct 5523 TCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATATGGGCTATTTCCCTCT 5582 Query 399 C 399 | Sbjct 5583 C 5583 >seq119 Length=390301 Score = 75.2 bits (82), Expect = 3e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 266 AGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTC 324 ||||||||||||||| |||| |||||||||||||| |||||| |||||||| ||||| Sbjct 45858 AGTGAGCTATTACGCTTTCTTCTAAGGATGGCTGCTTTCAAGCCCACCTCCTGTTTGTC 45800 >seq13 Length=1094033 Score = 73.4 bits (80), Expect = 9e-11 Identities = 88/120 (73%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 280 CACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACAT 339 ||||||| || || ||| |||||| | || |||||| ||| || || ||| || | Sbjct 203393 CACTCTTCCAGGGGTGGTTGCTTCTATGCAAACCTCTTGGCTGCCTCTATAACCTTACCT 203452 Query 340 CCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTC 399 ||| |||||||| || |||||||||||||||| | ||| ||| |||| |||||| Sbjct 203453 TATTTATCACTGAGTGGTCATTTAGGGGCCTTAGCTGGTAATCCTGGCAGTTTTCCTCTC 203512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177272992256