Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq889 152 8e-35
>seq889
Length=1069354
Score = 152 bits (168), Expect = 8e-35
Identities = 138/169 (82%), Gaps = 5/169 (3%)
Strand=Plus/Minus
Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61
||||||||||| |||| || |||| | || |||||||||| |||||||||||||| ||
Sbjct 298427 TACAAAGGGCAAGGACATAATCAAAGTGAT-TTGATGACTCATGCTTACTAGGAATT-CC 298370
Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTAC 121
|||||||||| || |||| ||||||||||| |||| |||| |||||||||||||||||
Sbjct 298369 TCGTTGAAGAACATTAATTATAATGATCTATCTCCATTACGAAGAAATTTCAAAGATTAC 298310
Query 122 CCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGC 170
||||| ||||| |||||| | |||| || ||||||| ||||||
Sbjct 298309 TCGGACGTGTCGATTAAGGTG-TGAACTCATT--TTACATCAATGTAGC 298264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751983688885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |