Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1197 95.1 2e-17
>seq1197
Length=203078
Score = 95.1 bits (104), Expect = 2e-17
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264
||||||||||||||||||||||| |||||||||| ||||||| ||| || ||||||||||
Sbjct 53112 TTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATC 53053
Query 265 GATAG 269
|||||
Sbjct 53052 GATAG 53048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854380869984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |