Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq395 98.7 4e-18
>seq395
Length=3405
Score = 98.7 bits (108), Expect = 4e-18
Identities = 89/111 (80%), Gaps = 1/111 (1%)
Strand=Plus/Plus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||| ||||||||||||||| | | ||| || |||| ||||||
Sbjct 3296 GCTGCGCCTCAACGCATTTTGGGGAGAACCAGCTAGCTCTG-GTTCGAGTGGCATTTCAC 3354
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCT 247
||||| ||||| |||||| || | |||||||| | ||| ||||||| |||
Sbjct 3355 CCCTAACCACAACTCATCCGCTGATTTTTCAACATCAGTCGGTTCGGACCT 3405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817559303936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |