Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078 215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq395 87.8 6e-15 >seq395 Length=3405 Score = 87.8 bits (96), Expect = 6e-15 Identities = 77/95 (81%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||||||||||| ||| |||||||||||| || ||||||| ||||| ||||||||||| || Sbjct 3405 AGGTCCGAACCGACTGATGTTGAAAAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 3346 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 | | ||| || |||||||||||| || ||| Sbjct 3345 CACTCGAAC-CAGAGCTAGCTGGTTCTCCCCAAAA 3312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689562169856