Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq395 87.8 6e-15
>seq395
Length=3405
Score = 87.8 bits (96), Expect = 6e-15
Identities = 77/95 (81%), Gaps = 1/95 (1%)
Strand=Plus/Minus
Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152
||||||||||| ||| |||||||||||| || ||||||| ||||| ||||||||||| ||
Sbjct 3405 AGGTCCGAACCGACTGATGTTGAAAAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 3346
Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187
| | ||| || |||||||||||| || |||
Sbjct 3345 CACTCGAAC-CAGAGCTAGCTGGTTCTCCCCAAAA 3312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689562169856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |