Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq3 239 2e-60
>seq3
Length=24464547
Score = 239 bits (264), Expect = 2e-60
Identities = 222/280 (79%), Gaps = 4/280 (1%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 24375704 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 24375645
Query 465 ACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACC 523
|||||| | || || ||| ||| || || || ||| | ||||||||| |||||
Sbjct 24375644 ACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGACC 24375588
Query 524 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583
|| | |||| | | || || || |||| |||||| |||| ||||||||||||||||
Sbjct 24375587 GACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGG 24375528
Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643
|||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
Sbjct 24375527 TGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATAC 24375468
Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| ||||||||||| ||||| | ||||||||||||||||
Sbjct 24375467 TGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 24375428
Score = 239 bits (264), Expect = 2e-60
Identities = 222/280 (79%), Gaps = 4/280 (1%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 24427257 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 24427316
Query 465 ACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACC 523
|||||| | || || ||| ||| || || || ||| | ||||||||| |||||
Sbjct 24427317 ACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGACC 24427373
Query 524 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583
|| | |||| | | || || || |||| |||||| |||| ||||||||||||||||
Sbjct 24427374 GACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGG 24427433
Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643
|||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
Sbjct 24427434 TGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATAC 24427493
Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| ||||||||||| ||||| | ||||||||||||||||
Sbjct 24427494 TGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 24427533
Score = 237 bits (262), Expect = 7e-60
Identities = 223/281 (79%), Gaps = 5/281 (2%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 24339515 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 24339456
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522
||||||| | || || ||| ||| || || || ||| | ||||||||| ||||
Sbjct 24339455 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 24339399
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| |||||||||||||||
Sbjct 24339398 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 24339339
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 24339338 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 24339279
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 24339278 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 24339238
Score = 237 bits (262), Expect = 7e-60
Identities = 223/281 (79%), Gaps = 5/281 (2%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 24350142 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 24350083
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522
||||||| | || || ||| ||| || || || ||| | ||||||||| ||||
Sbjct 24350082 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGTGGGTGCACCGCCGAC 24350026
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| |||||||||||||||
Sbjct 24350025 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 24349966
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 24349965 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 24349906
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 24349905 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 24349865
Score = 237 bits (262), Expect = 7e-60
Identities = 223/281 (79%), Gaps = 5/281 (2%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 24360179 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 24360120
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522
||||||| | || || ||| ||| || || || ||| | ||||||||| ||||
Sbjct 24360119 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGTGGGTGCACCGCCGAC 24360063
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| |||||||||||||||
Sbjct 24360062 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 24360003
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 24360002 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 24359943
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 24359942 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 24359902
Score = 237 bits (262), Expect = 7e-60
Identities = 223/281 (79%), Gaps = 5/281 (2%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 24388316 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 24388375
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522
||||||| | || || ||| ||| || || || ||| | ||||||||| ||||
Sbjct 24388376 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 24388432
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| |||||||||||||||
Sbjct 24388433 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 24388492
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 24388493 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 24388552
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 24388553 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 24388593
Score = 237 bits (262), Expect = 7e-60
Identities = 223/281 (79%), Gaps = 5/281 (2%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 24397776 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 24397835
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522
||||||| | || || ||| ||| || || || ||| | ||||||||| ||||
Sbjct 24397836 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 24397892
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| |||||||||||||||
Sbjct 24397893 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 24397952
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 24397953 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 24398012
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 24398013 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 24398053
Score = 237 bits (262), Expect = 7e-60
Identities = 223/281 (79%), Gaps = 5/281 (2%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 24408687 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 24408746
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522
||||||| | || || ||| ||| || || || ||| | ||||||||| ||||
Sbjct 24408747 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 24408803
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| |||||||||||||||
Sbjct 24408804 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 24408863
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 24408864 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 24408923
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 24408924 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 24408964
Score = 237 bits (262), Expect = 7e-60
Identities = 223/281 (79%), Gaps = 5/281 (2%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 24417525 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 24417584
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522
||||||| | || || ||| ||| || || || ||| | ||||||||| ||||
Sbjct 24417585 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 24417641
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| |||||||||||||||
Sbjct 24417642 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 24417701
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 24417702 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 24417761
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 24417762 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 24417802
Score = 237 bits (262), Expect = 7e-60
Identities = 223/281 (79%), Gaps = 5/281 (2%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 24437260 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 24437319
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522
||||||| | || || ||| ||| || || || ||| | ||||||||| ||||
Sbjct 24437320 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 24437376
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| |||||||||||||||
Sbjct 24437377 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 24437436
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 24437437 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 24437496
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 24437497 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 24437537
Score = 232 bits (256), Expect = 3e-58
Identities = 222/281 (79%), Gaps = 5/281 (2%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 24311501 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 24311442
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522
||||||| | || || ||| ||| || || || ||| | ||||||||| ||||
Sbjct 24311441 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 24311385
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| ||||||| |||||||
Sbjct 24311384 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCAAAAGATG 24311325
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 24311324 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 24311265
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 24311264 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 24311224
Score = 221 bits (244), Expect = 5e-55
Identities = 221/281 (79%), Gaps = 7/281 (2%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463
|| ||||||| | ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 24330044 CGACCCGTCT-GAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 24329986
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522
||||||| | || || ||| ||| || || || ||| | ||||||||| ||||
Sbjct 24329985 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 24329929
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| |||||||||||||||
Sbjct 24329928 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 24329869
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 24329868 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 24329809
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||| ||||| ||||| | ||||||||||||||||
Sbjct 24329808 CTGACGTGC-AATCGTTCGTCTGACTTGGGTATAGGGGCGA 24329769
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 24311888 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 24311829
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||||
Sbjct 24311828 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 24311769
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 24311768 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 24311724
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 24330431 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 24330372
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||||
Sbjct 24330371 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 24330312
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 24330311 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 24330267
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 24350529 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 24350470
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||||
Sbjct 24350469 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 24350410
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 24350409 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 24350365
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 24387929 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 24387988
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||||
Sbjct 24387989 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 24388048
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 24388049 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 24388093
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 24408300 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 24408359
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||||
Sbjct 24408360 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 24408419
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 24408420 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 24408464
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 24417138 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 24417197
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||||
Sbjct 24417198 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 24417257
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 24417258 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 24417302
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 24426870 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 24426929
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||||
Sbjct 24426930 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 24426989
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 24426990 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 24427034
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 24436873 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 24436932
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||||
Sbjct 24436933 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 24436992
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 24436993 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 24437037
Score = 150 bits (166), Expect = 7e-34
Identities = 133/165 (81%), Gaps = 1/165 (1%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 24376090 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 24376031
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||||
Sbjct 24376030 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 24375971
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | || |||||| | |||||||||
Sbjct 24375970 TGAAAAGAGAGTCAAAGAGTGCTTG-AATTGTCGGGAGGGAAGCG 24375927
Score = 150 bits (166), Expect = 7e-34
Identities = 133/165 (81%), Gaps = 1/165 (1%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 24397390 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 24397449
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| || |
Sbjct 24397450 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGAC-T 24397508
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 24397509 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 24397553
Score = 141 bits (156), Expect = 4e-31
Identities = 132/165 (80%), Gaps = 2/165 (1%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 24339900 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 24339841
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
| |||| ||| |||||||||||||| ||||||| | || |||||||||||| || |
Sbjct 24339840 T-AATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGAC-T 24339783
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 24339782 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 24339738
Score = 104 bits (114), Expect = 1e-19
Identities = 87/107 (81%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152
|||||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||
Sbjct 24360508 GCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGAC 24360449
Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 24360448 TTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 24360402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079985070800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |